RNA id: TU83694



Basic Information


Item Value
RNA id TU83694
length 344
lncRNA type sense_over
GC content 0.48
exon number 2
gene id G62056
representative True

Chromosome Information


Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 5064638 ~ 5071737 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


cttttcaatgatattcatattttttgagatgcgctAGAACACTCTCTAAGCAGCCTCCACACACCTTCACTGAACAATAGTTGAAAAGTTGGTTGAAGCCCGTGCAGAGAGGCTGTGTCATTGGAACAGCTTGACCGTTCACTGAAGTGTGAATTTATCACCTGCACAGCACCCCCTGCCTGCAGGAGGACTGTTACAGGAACAATTCGTTCCTAAAGCTGCGCCACACGCCTGAGCCTCAGTGTGATACGTCGTTCTGTTCCCTCTGCTCGCACACTGTGAACTCCCAACAGGATCACTTTCTTAAagacgtgcacacacacacacacacacacacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83692 lncRNA downstream 20827 5042509 ~ 5043811 (-) True G62054
TU83634 lncRNA downstream 268628 4795715 ~ 4796010 (-) True G62000
TU83631 lncRNA downstream 294465 4769963 ~ 4770173 (-) True G61997
TU83586 lncRNA downstream 429217 4635153 ~ 4635421 (-) True G61955
TU83576 lncRNA downstream 438531 4625497 ~ 4626107 (-) True G61945
TU83701 lncRNA upstream 121823 5193560 ~ 5194781 (-) True G62063
TU83726 lncRNA upstream 221118 5292855 ~ 5293062 (-) True G62083
TU83727 lncRNA upstream 280191 5351928 ~ 5352169 (-) True G62084
TU83730 lncRNA upstream 288808 5360545 ~ 5360794 (-) True G62087
TU83732 lncRNA upstream 327217 5398954 ~ 5399189 (-) True G62089
XM_022671256.1 mRNA downstream 603113 4447876 ~ 4461525 (-) True LOC107197701
XM_022671254.1 mRNA downstream 638482 4335118 ~ 4426156 (-) False LOC103039416
XM_007252710.3 mRNA upstream 242820 5314557 ~ 5336399 (-) True LOC103042505
XM_022671259.1 mRNA upstream 384972 5456709 ~ 5494651 (-) True LOC103037729
XM_022671260.1 mRNA upstream 384972 5456709 ~ 5494645 (-) False LOC103037729
XM_022671261.1 mRNA upstream 572772 5644509 ~ 5653023 (-) True cmas
XM_007229732.3 mRNA upstream 586711 5658448 ~ 5663281 (-) True kcnj8
TU83573 other downstream 442061 4622213 ~ 4622577 (-) True G61942
XR_002650185.1 other downstream 682587 4342917 ~ 4382051 (-) False LOC103039416
XR_455047.3 other downstream 682588 4335118 ~ 4382050 (-) True LOC103039416
TU83243 other downstream 1406370 3651966 ~ 3658268 (-) False G61676
TU83189 other downstream 1515936 3544185 ~ 3548702 (-) False mdm1
TU84110 other upstream 1302732 6374469 ~ 6374980 (-) True G62377
XR_002650186.1 other upstream 1561273 6633010 ~ 6695384 (-) False pphln1
TU84255 other upstream 1599873 6671610 ~ 6737948 (-) False G62484
XR_002650150.1 other upstream 1650365 6722102 ~ 6723530 (-) True LOC111192868
TU84254 other upstream 1663426 6735163 ~ 6737948 (-) True G62484

Expression Profile