Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU85058 |
| length | 391 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G63044 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035903.1 |
| NCBI id | CM008306.1 |
| chromosome length | 40813162 |
| location | 9500304 ~ 9500694 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | molecular_function |
| GO:0005215 | transporter activity | molecular_function |
| id | description |
|---|---|
| ko00330 | Arginine and proline metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84976 | lncRNA | upstream | 17776 | 9482262 ~ 9482528 (+) | True | G63027 |
| TU84967 | lncRNA | upstream | 40616 | 9433659 ~ 9459688 (+) | True | G63022 |
| TU84961 | lncRNA | upstream | 66751 | 9431499 ~ 9433553 (+) | False | LOC111192948 |
| TU84964 | lncRNA | upstream | 66751 | 9431499 ~ 9433553 (+) | True | LOC111192948 |
| TU84966 | lncRNA | upstream | 66751 | 9431499 ~ 9433553 (+) | False | LOC111192948 |
| TU85061 | lncRNA | downstream | 33879 | 9534573 ~ 9534831 (+) | True | G63047 |
| TU85064 | lncRNA | downstream | 141787 | 9642481 ~ 9644511 (+) | True | G63050 |
| TU85086 | lncRNA | downstream | 310178 | 9810872 ~ 9866501 (+) | True | G63067 |
| TU85101 | lncRNA | downstream | 381421 | 9882115 ~ 9884275 (+) | True | G63081 |
| TU85138 | lncRNA | downstream | 471558 | 9972252 ~ 9976111 (+) | True | G63090 |
| XM_015604951.2 | mRNA | upstream | 77023 | 9293824 ~ 9423281 (+) | False | phf21b |
| XM_022671319.1 | mRNA | downstream | 117972 | 9618666 ~ 9639280 (+) | True | LOC103035489 |
| XM_007237082.3 | mRNA | downstream | 184663 | 9685357 ~ 9693289 (+) | True | LOC103035797 |
| XM_007237093.2 | mRNA | downstream | 279777 | 9780471 ~ 9783136 (+) | True | LOC103038615 |
| XM_007237086.3 | mRNA | downstream | 388523 | 9889217 ~ 9898004 (+) | True | LOC103036813 |
| XM_022671320.1 | mRNA | downstream | 399791 | 9900485 ~ 9925895 (+) | True | LOC103038308 |
| XR_002650190.1 | other | upstream | 59740 | 9433437 ~ 9440564 (+) | False | LOC111192948 |
| TU84760 | other | upstream | 960181 | 8533348 ~ 8540123 (+) | True | LOC103041471 |
| TU84764 | other | upstream | 967072 | 8532759 ~ 8533232 (+) | False | LOC103041471 |
| TU84211 | other | upstream | 2644542 | 6851230 ~ 6855762 (+) | True | G62455 |
| TU83965 | other | upstream | 3506310 | 5982373 ~ 5993994 (+) | True | c7h12orf75 |
| TU85065 | other | downstream | 145885 | 9646579 ~ 9650087 (+) | True | G63051 |
| TU85565 | other | downstream | 2967356 | 12468050 ~ 12468902 (+) | True | G63432 |
| trnag-gcc_1 | other | downstream | 3158754 | 12659448 ~ 12659518 (+) | True | trnag-gcc_1 |
| TU85654 | other | downstream | 3655532 | 13156226 ~ 13161320 (+) | False | LOC111192955 |
| TU86374 | other | downstream | 5244041 | 14744735 ~ 14745082 (+) | True | G64015 |
