RNA id: TU86344



Basic Information


Item Value
RNA id TU86344
length 214
lncRNA type inter_gene
GC content 0.48
exon number 4
gene id G63994
representative True

Chromosome Information


Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 14488193 ~ 14488804 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


ctatcagacctcactccaactcccataattcacctgcacccactatcagacctctttactccaactcccataattcacctgcacccactatcagacctctttactccaactcccataattcacctgcacccactatcagacctctttactccaactcccataattcacctgcacccactatcagacctcactccaactcccataattcacctgc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU86341 lncRNA downstream 13785 14474025 ~ 14474408 (-) True G63993
TU86309 lncRNA downstream 220435 14267405 ~ 14267758 (-) True G63963
TU86300 lncRNA downstream 260873 14226265 ~ 14227320 (-) True G63955
TU86291 lncRNA downstream 291684 14191688 ~ 14196509 (-) True G63947
TU86283 lncRNA downstream 394717 14090379 ~ 14093476 (-) True G63939
TU86347 lncRNA upstream 76845 14565649 ~ 14565997 (-) True G63997
TU86350 lncRNA upstream 109944 14598748 ~ 14599009 (-) True G64000
TU86366 lncRNA upstream 229998 14718802 ~ 14722535 (-) True G64011
TU86378 lncRNA upstream 284071 14772875 ~ 14773164 (-) True G64018
TU86405 lncRNA upstream 391541 14880345 ~ 14880579 (-) True G64043
XM_007234980.3 mRNA downstream 398641 14080289 ~ 14089552 (-) True kin
XM_022671385.1 mRNA downstream 490700 13922539 ~ 13997493 (-) True sfmbt2
XM_022671382.1 mRNA downstream 600325 13841193 ~ 13887868 (-) True prkcq
XM_022671383.1 mRNA downstream 618495 13841193 ~ 13869698 (-) False prkcq
XM_022671379.1 mRNA downstream 732839 13712234 ~ 13755354 (-) False LOC103038708
XM_022671174.1 mRNA upstream 501542 14990346 ~ 14992730 (-) True LOC111192906
XM_022671391.1 mRNA upstream 782059 15270863 ~ 15554632 (-) True snd1
XM_022671392.1 mRNA upstream 1090070 15578874 ~ 15624348 (-) False LOC103045938
XM_007245021.3 mRNA upstream 1090070 15578874 ~ 15624348 (-) True LOC103045938
XM_022671393.1 mRNA upstream 1182502 15671306 ~ 15867795 (-) True LOC103027187
TU85708 other downstream 2122454 12320555 ~ 12365739 (-) True G63516
TU85294 other downstream 4076962 10314799 ~ 10411231 (-) False G63217
TU85152 other downstream 4865405 9618661 ~ 9622788 (-) True G63104
TU84600 other downstream 6314391 8166678 ~ 8173802 (-) False LOC111192870
TU84254 other downstream 7750245 6735163 ~ 6737948 (-) True G62484
TU86395 other upstream 296517 14785321 ~ 14786149 (-) True G64034
TU86473 other upstream 505360 14994164 ~ 14994832 (-) True G64060
TU86884 other upstream 2096261 16585065 ~ 16585647 (-) True G64387
TU87029 other upstream 2393531 16882335 ~ 16887903 (-) False G64492
TU87032 other upstream 2393531 16882335 ~ 16887903 (-) True G64492

Expression Profile