RNA id: TU86767



Basic Information


Item Value
RNA id TU86767
length 468
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G64292
representative True

Chromosome Information


Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 16360903 ~ 16368394 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


GGGAGACGGAGGGATggaggaggacgtaagtgcaaagatatttatttttaaacaaacaagataaatcaaaacaaataaaacacgggtaacgcaaaacaacaagacttggGATAAcaaactaagaaacacagactaagaaactagGAAACATACGGGCAGCAAGGATACATACAGACTAAGGATCTcggatacaggatacaaaatatacaggatacaaaatacaaaagactcgacactgaacattcaaacagaggggcttaaatacaggaggggagtgagaaacacctgggctgggatgacgagggggcggggttacaaacaggacacaggtgagaacactaatagctagggcagggctggggcggagctatggtggagacaaaaacaacaacacaagcacatggctgggaacacttgacaggaaaacagaggggcaggagcacaagagaccaaacgagGGAGAAACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU86750 lncRNA upstream 193525 16167064 ~ 16167378 (+) True G64279
TU86704 lncRNA upstream 210929 16149768 ~ 16149974 (+) True G64237
TU86700 lncRNA upstream 216185 16144285 ~ 16144718 (+) True G64233
TU86656 lncRNA upstream 404687 15956009 ~ 15956216 (+) True G64205
TU86596 lncRNA upstream 611330 15745081 ~ 15749573 (+) True G64159
TU86766 lncRNA downstream 9266 16377660 ~ 16432412 (+) True G64291
TU86853 lncRNA downstream 122792 16491186 ~ 16532783 (+) True G64362
TU86895 lncRNA downstream 240463 16608857 ~ 16609213 (+) True G64393
TU86909 lncRNA downstream 327546 16695940 ~ 16707096 (+) False G64403
TU86910 lncRNA downstream 332719 16701113 ~ 16707096 (+) True G64403
XM_015604721.2 mRNA upstream 45904 16218828 ~ 16314999 (+) True LOC103047366
XM_022671399.1 mRNA upstream 219504 16112859 ~ 16141399 (+) False LOC103046856
XM_007245023.3 mRNA upstream 219504 16112948 ~ 16141399 (+) True LOC103046856
XM_022671398.1 mRNA upstream 259379 15998201 ~ 16101524 (+) True LOC103027800
XM_007245022.3 mRNA upstream 406971 15923726 ~ 15953932 (+) True LOC103046551
XM_015602656.2 mRNA downstream 26932 16395326 ~ 16426623 (+) False arid2
XM_007237948.3 mRNA downstream 26933 16395327 ~ 16426623 (+) True arid2
XM_007237950.3 mRNA downstream 26933 16395327 ~ 16426623 (+) False arid2
XM_007237949.3 mRNA downstream 26934 16395328 ~ 16426623 (+) False arid2
XM_015602657.2 mRNA downstream 247177 16615571 ~ 16651658 (+) False LOC103026270
TU86374 other upstream 1615821 14744735 ~ 14745082 (+) True G64015
TU85654 other upstream 3199583 13156226 ~ 13161320 (+) False LOC111192955
trnag-gcc_1 other upstream 3701385 12659448 ~ 12659518 (+) True trnag-gcc_1
TU85565 other upstream 3892001 12468050 ~ 12468902 (+) True G63432
TU85065 other upstream 6710816 9646579 ~ 9650087 (+) True G63051
TU86778 other downstream 53840 16422234 ~ 16426613 (+) False arid2
TU86763 other downstream 70826 16439220 ~ 16442449 (+) True G64289
TU86945 other downstream 384649 16753043 ~ 16753560 (+) True G64431
TU86961 other downstream 464902 16833296 ~ 16864454 (+) False LOC103030423
TU86972 other downstream 496124 16864518 ~ 16888195 (+) True LOC103030423

Expression Profile