RNA id: XM_007256034.3


Basic Information

Item Value
RNA id XM_007256034.3
length 763
RNA type mRNA
GC content 0.39
exon number 4
gene id c7h11orf98
representative False

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 22999370 ~ 23003468 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ttatttagacttttattgtatattgtgtGAACCGGAAGTCATATTTAACAGGCTCCTCACGTTGTAGTAAGCATGGCTCCAGGTGGAAAAATCAACAAGCCTAAAACAGAATTGGGGAAAAATCTCTTCAAGAGGAGGAGAGTTCTGACAAagcagaggaggaagaaacatTGCATTATTGGGGCAGTGGTGGACGAAGGCCTTATAACAAAACACCACCTGAAAAAAAGAAGCACTAGTTCTAGGGCAAACATCACCTTGtctgggaagaaaaaaaacaagttactCAAGCAGCTGCGCCACATGGAGAAAGAAAAGTCAAGCATGCAAGtTGAAACCGTTTCAGTGAAGAAagctcctgctcctgctgctaaGAAAACTTCTACTGCCAGACAGCAAACAAAAAATCCCTCCTCATCCGCTGTTGTTGAAATGATGGATGTGCAATAAATGAACAATTTTTTGGAGTTCACTGCAACTGTGCTTGACCAAAGGGACTGACAAATATTCACTAGTTATGGTGCAAGCTGTTGGTCTTCAGATGTGCACATCAGCTGAATACTACTGTTACTTGCTACTATAATGCAAGTCTTTCTGGTTAATAAGCCTTTGTGGATGCCTGTGCCTGTGTGTTAGGGATCcataaagaatattttttattgttgtttctgCTGCCCTTTTTATAATAGTCCAGATATCTGCTTTATAACTGCACTCAGTACAATATAtgcataataaaaacatatgatTGCAGATACAAATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89218 lncRNA upstream 30699 22963871 ~ 22969303 (+) True G66143
TU89219 lncRNA upstream 37160 22958441 ~ 22962842 (+) True G66144
TU89215 lncRNA upstream 44568 22954277 ~ 22955434 (+) True G66140
TU89135 lncRNA upstream 680454 22318843 ~ 22319548 (+) True G66062
TU89127 lncRNA upstream 715930 22283434 ~ 22284072 (+) True G66056
TU89293 lncRNA downstream 104418 23107886 ~ 23204707 (+) True G66183
TU89320 lncRNA downstream 180889 23184357 ~ 23189666 (+) True G66201
TU89345 lncRNA downstream 222562 23226030 ~ 23226867 (+) True G66207
TU89331 lncRNA downstream 313416 23316884 ~ 23323096 (+) False eps8
TU89343 lncRNA downstream 313416 23316884 ~ 23323361 (+) False eps8
XM_022671534.1 mRNA upstream 50803 22939555 ~ 22949199 (+) True ccdc167
XM_022671533.1 mRNA upstream 50803 22939561 ~ 22949199 (+) False ccdc167
XM_007238164.3 mRNA upstream 702323 22284747 ~ 22297679 (+) True bcap29
XM_007238163.3 mRNA upstream 702323 22284747 ~ 22297679 (+) False bcap29
XM_022671528.1 mRNA upstream 721980 22274641 ~ 22278022 (+) True dus4l
XM_015607538.2 mRNA downstream 1287 23004755 ~ 23012773 (+) False LOC103025638
XM_007256033.3 mRNA downstream 3465 23006933 ~ 23012773 (+) False LOC103025638
XM_022671535.1 mRNA downstream 3990 23007458 ~ 23012773 (+) True LOC103025638
XM_007256032.3 mRNA downstream 16916 23020384 ~ 23085044 (+) True lrp6
XM_007256029.3 mRNA downstream 127612 23131080 ~ 23138011 (+) True crebl2
TU89211 other upstream 50810 22939602 ~ 22949192 (+) False ccdc167
TU88777 other upstream 1315168 21629862 ~ 21684834 (+) False gen1
TU88525 other upstream 1975428 21024175 ~ 21024574 (+) True G65575
TU88511 other upstream 2042367 20957135 ~ 20957635 (+) True G65565
XR_002650196.1 other upstream 3205723 19780663 ~ 19794279 (+) False LOC103037311
TU89299 other downstream 127626 23131094 ~ 23137954 (+) False crebl2
TU89300 other downstream 127626 23131094 ~ 23137954 (+) False crebl2
TU89467 other downstream 440706 23444174 ~ 23444677 (+) True G66296
TU89474 other downstream 479865 23483333 ~ 23483933 (+) True G66303
TU89518 other downstream 694684 23698152 ~ 23710076 (+) False LOC103027234

Expression Profile