Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU89370 |
| length | 1062 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 3 |
| gene id | LOC111193001 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035903.1 |
| NCBI id | CM008306.1 |
| chromosome length | 40813162 |
| location | 23396483 ~ 23400422 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89362 | lncRNA | upstream | 192 | 23395746 ~ 23396291 (+) | True | G66223 |
| TU89343 | lncRNA | upstream | 73122 | 23316884 ~ 23323361 (+) | False | eps8 |
| TU89331 | lncRNA | upstream | 73387 | 23316884 ~ 23323096 (+) | False | eps8 |
| TU89345 | lncRNA | upstream | 169616 | 23226030 ~ 23226867 (+) | True | G66207 |
| TU89320 | lncRNA | upstream | 206817 | 23184357 ~ 23189666 (+) | True | G66201 |
| TU89368 | lncRNA | downstream | 720 | 23398329 ~ 23399420 (+) | False | LOC111193001 |
| TU89371 | lncRNA | downstream | 720 | 23398329 ~ 23399420 (+) | False | LOC111193001 |
| TU89476 | lncRNA | downstream | 111366 | 23508975 ~ 23509533 (+) | False | G66305 |
| TU89477 | lncRNA | downstream | 111366 | 23508975 ~ 23509239 (+) | True | G66305 |
| TU89506 | lncRNA | downstream | 176494 | 23574103 ~ 23574333 (+) | True | G66334 |
| XM_022671543.1 | mRNA | upstream | 73367 | 23222517 ~ 23323116 (+) | False | eps8 |
| XM_015607512.2 | mRNA | downstream | 53954 | 23451563 ~ 23544843 (+) | False | rerg |
| XM_007256037.3 | mRNA | downstream | 69924 | 23467533 ~ 23548257 (+) | True | rerg |
| XM_007256038.3 | mRNA | downstream | 300561 | 23698170 ~ 23720094 (+) | True | LOC103027234 |
| XM_007239000.3 | mRNA | downstream | 518697 | 23916306 ~ 23953720 (+) | True | etv6 |
| XM_007239001.3 | mRNA | downstream | 518697 | 23916306 ~ 23953720 (+) | False | etv6 |
| TU89299 | other | upstream | 258529 | 23131094 ~ 23137954 (+) | False | crebl2 |
| TU89300 | other | upstream | 258529 | 23131094 ~ 23137954 (+) | False | crebl2 |
| TU89229 | other | upstream | 393062 | 22999370 ~ 23003421 (+) | True | c7h11orf98 |
| TU89211 | other | upstream | 447291 | 22939602 ~ 22949192 (+) | False | ccdc167 |
| TU88777 | other | upstream | 1711649 | 21629862 ~ 21684834 (+) | False | gen1 |
| TU89467 | other | downstream | 46565 | 23444174 ~ 23444677 (+) | True | G66296 |
| TU89474 | other | downstream | 85724 | 23483333 ~ 23483933 (+) | True | G66303 |
| TU89518 | other | downstream | 300543 | 23698152 ~ 23710076 (+) | False | LOC103027234 |
| XR_002650203.1 | other | downstream | 969883 | 24367492 ~ 24383022 (+) | False | rpap3 |
| XR_002650202.1 | other | downstream | 970764 | 24368373 ~ 24383022 (+) | True | rpap3 |
