Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU89512 |
| length | 916 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 3 |
| gene id | LOC111192880 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035903.1 |
| NCBI id | CM008306.1 |
| chromosome length | 40813162 |
| location | 23594228 ~ 23599591 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89510 | lncRNA | upstream | 49 | 23594861 ~ 23595114 (+) | True | G66338 |
| TU89506 | lncRNA | upstream | 20830 | 23574103 ~ 23574333 (+) | True | G66334 |
| TU89476 | lncRNA | upstream | 85630 | 23508975 ~ 23509533 (+) | False | G66305 |
| TU89477 | lncRNA | upstream | 85924 | 23508975 ~ 23509239 (+) | True | G66305 |
| TU89368 | lncRNA | upstream | 195743 | 23398329 ~ 23399420 (+) | False | LOC111193001 |
| TU89529 | lncRNA | downstream | 218482 | 23818073 ~ 23820977 (+) | True | G66353 |
| TU89572 | lncRNA | downstream | 312237 | 23911828 ~ 23912211 (+) | True | G66382 |
| TU89579 | lncRNA | downstream | 376649 | 23976240 ~ 23977946 (+) | True | G66389 |
| TU89679 | lncRNA | downstream | 538314 | 24137905 ~ 24138185 (+) | True | G66472 |
| TU89683 | lncRNA | downstream | 586543 | 24186134 ~ 24186383 (+) | True | G66476 |
| XM_007256037.3 | mRNA | upstream | 46906 | 23467533 ~ 23548257 (+) | True | rerg |
| XM_015607512.2 | mRNA | upstream | 50320 | 23451563 ~ 23544843 (+) | False | rerg |
| XM_022671545.1 | mRNA | upstream | 272047 | 23222517 ~ 23323116 (+) | False | eps8 |
| XM_007256038.3 | mRNA | downstream | 98579 | 23698170 ~ 23720094 (+) | True | LOC103027234 |
| XM_007239000.3 | mRNA | downstream | 316715 | 23916306 ~ 23953720 (+) | True | etv6 |
| XM_007239001.3 | mRNA | downstream | 316715 | 23916306 ~ 23953720 (+) | False | etv6 |
| XM_007239002.3 | mRNA | downstream | 316715 | 23916306 ~ 23953720 (+) | False | etv6 |
| XM_007239003.3 | mRNA | downstream | 316715 | 23916306 ~ 23953720 (+) | False | etv6 |
| TU89474 | other | upstream | 111230 | 23483333 ~ 23483933 (+) | True | G66303 |
| TU89467 | other | upstream | 150486 | 23444174 ~ 23444677 (+) | True | G66296 |
| TU89299 | other | upstream | 457209 | 23131094 ~ 23137954 (+) | False | crebl2 |
| TU89300 | other | upstream | 457209 | 23131094 ~ 23137954 (+) | False | crebl2 |
| TU89229 | other | upstream | 591742 | 22999370 ~ 23003421 (+) | True | c7h11orf98 |
| TU89518 | other | downstream | 98561 | 23698152 ~ 23710076 (+) | False | LOC103027234 |
| XR_002650203.1 | other | downstream | 767901 | 24367492 ~ 24383022 (+) | False | rpap3 |
| XR_002650202.1 | other | downstream | 768782 | 24368373 ~ 24383022 (+) | True | rpap3 |
| XR_002650204.1 | other | downstream | 768782 | 24368373 ~ 24383022 (+) | False | rpap3 |
| TU89793 | other | downstream | 919031 | 24518622 ~ 24526052 (+) | True | osgep |
