Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU89978 |
| length | 639 |
| lncRNA type | sense_over |
| GC content | 0.35 |
| exon number | 1 |
| gene id | cspg4 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035903.1 |
| NCBI id | CM008306.1 |
| chromosome length | 40813162 |
| location | 25189185 ~ 25300875 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89988 | lncRNA | upstream | 39338 | 25258379 ~ 25259573 (+) | True | G66710 |
| TU89976 | lncRNA | upstream | 125940 | 25172631 ~ 25172971 (+) | True | G66698 |
| TU89963 | lncRNA | upstream | 188898 | 25107586 ~ 25110013 (+) | True | G66692 |
| TU89960 | lncRNA | upstream | 196529 | 25101087 ~ 25102382 (+) | True | G66689 |
| TU89955 | lncRNA | upstream | 209362 | 25089283 ~ 25089549 (+) | True | G66685 |
| TU89991 | lncRNA | downstream | 7070 | 25306619 ~ 25306983 (+) | True | G66712 |
| TU89993 | lncRNA | downstream | 29232 | 25328781 ~ 25334442 (+) | True | G66714 |
| TU89998 | lncRNA | downstream | 35786 | 25335335 ~ 25340456 (+) | True | G66718 |
| TU90024 | lncRNA | downstream | 179311 | 25478860 ~ 25519547 (+) | True | G66739 |
| TU90033 | lncRNA | downstream | 260945 | 25560494 ~ 25561181 (+) | True | G66748 |
| XM_007228543.3 | mRNA | upstream | 651235 | 24599166 ~ 24647676 (+) | True | lingo1 |
| XM_007228544.3 | mRNA | upstream | 651235 | 24599675 ~ 24647676 (+) | False | lingo1 |
| XM_007229737.3 | mRNA | upstream | 739289 | 24555601 ~ 24559622 (+) | True | LOC103033942 |
| XM_015605311.2 | mRNA | upstream | 753830 | 24525367 ~ 24545081 (+) | False | osgep |
| XM_007229739.3 | mRNA | upstream | 781555 | 24510490 ~ 24517356 (+) | True | LOC103034593 |
| XM_007228547.3 | mRNA | downstream | 78888 | 25378437 ~ 25387120 (+) | True | snupn |
| XM_007228548.3 | mRNA | downstream | 94886 | 25394435 ~ 25423664 (+) | True | ptpn9 |
| XM_022671561.1 | mRNA | downstream | 127188 | 25426737 ~ 25447821 (+) | False | sin3a |
| XM_022671563.1 | mRNA | downstream | 129345 | 25428894 ~ 25449256 (+) | True | sin3a |
| XM_022671562.1 | mRNA | downstream | 131102 | 25430651 ~ 25447821 (+) | False | sin3a |
| TU89825 | other | upstream | 614331 | 24645726 ~ 24684580 (+) | False | lingo1 |
| TU89793 | other | upstream | 772859 | 24518622 ~ 24526052 (+) | True | osgep |
| XR_002650203.1 | other | upstream | 915889 | 24367492 ~ 24383022 (+) | False | rpap3 |
| TU90292 | other | downstream | 790283 | 26089832 ~ 26092089 (+) | False | LOC111192916 |
| XR_002650161.1 | other | downstream | 2197246 | 27496795 ~ 27497727 (+) | True | LOC111192885 |
| TU90964 | other | downstream | 4257587 | 29557136 ~ 29558666 (+) | True | G67459 |
| TU90953 | other | downstream | 4286427 | 29585976 ~ 29592287 (+) | True | G67453 |
| TU91186 | other | downstream | 4988255 | 30287804 ~ 30288744 (+) | False | LOC111193014 |
