Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022671276.1 |
| length | 1214 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 8 |
| gene id | zcrb1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035903.1 |
| NCBI id | CM008306.1 |
| chromosome length | 40813162 |
| location | 6695590 ~ 6703894 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006397 | mRNA processing | biological_process |
| GO:0008380 | RNA splicing | biological_process |
| GO:0005681 | spliceosomal complex | cellular_component |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K13154 | ZCRB1; U11/U12 small nuclear ribonucleoprotein 31 kDa protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84168 | lncRNA | upstream | 22132 | 6665395 ~ 6673458 (+) | True | G62420 |
| TU84143 | lncRNA | upstream | 163767 | 6474432 ~ 6531823 (+) | True | G62400 |
| TU84138 | lncRNA | upstream | 163767 | 6528509 ~ 6531823 (+) | False | G62400 |
| TU84139 | lncRNA | upstream | 164711 | 6430591 ~ 6530879 (+) | False | G62400 |
| TU84119 | lncRNA | upstream | 299037 | 6396286 ~ 6396553 (+) | True | G62386 |
| TU84184 | lncRNA | downstream | 30587 | 6734481 ~ 6734828 (+) | True | G62431 |
| TU84174 | lncRNA | downstream | 94446 | 6798340 ~ 6830009 (+) | True | G62425 |
| XR_002650188.1 | lncRNA | downstream | 220284 | 6924178 ~ 6942785 (+) | True | LOC111192941 |
| TU84234 | lncRNA | downstream | 398386 | 7102280 ~ 7102659 (+) | True | G62471 |
| TU84371 | lncRNA | downstream | 490882 | 7194776 ~ 7194982 (+) | True | G62576 |
| XM_007245029.2 | mRNA | upstream | 62785 | 6601383 ~ 6632805 (+) | True | LOC103021937 |
| XM_007245028.3 | mRNA | upstream | 62785 | 6618345 ~ 6632805 (+) | False | LOC103021937 |
| XM_007245033.3 | mRNA | upstream | 254016 | 6428006 ~ 6441574 (+) | True | pus7l |
| XM_022671272.1 | mRNA | upstream | 269313 | 6409917 ~ 6426277 (+) | True | LOC103023466 |
| XM_022671271.1 | mRNA | upstream | 361250 | 6216811 ~ 6334340 (+) | True | nell2 |
| XM_007245027.3 | mRNA | downstream | 53660 | 6757554 ~ 6771361 (+) | True | LOC103021606 |
| XM_007245025.3 | mRNA | downstream | 78354 | 6782248 ~ 6793867 (+) | True | LOC103047680 |
| XM_022671286.1 | mRNA | downstream | 249122 | 6953016 ~ 7094083 (+) | True | foxp2 |
| XM_007252716.3 | mRNA | downstream | 435957 | 7139851 ~ 7170640 (+) | True | mdfic |
| XM_007252717.3 | mRNA | downstream | 435957 | 7139851 ~ 7170640 (+) | False | mdfic |
| TU83965 | other | upstream | 701596 | 5982373 ~ 5993994 (+) | True | c7h12orf75 |
| TU83815 | other | upstream | 941306 | 5746204 ~ 5754284 (+) | True | LOC111192936 |
| TU83070 | other | upstream | 3391592 | 3296546 ~ 3303998 (+) | True | G61575 |
| TU83069 | other | upstream | 3391592 | 3299089 ~ 3303998 (+) | False | G61575 |
| TU82609 | other | upstream | 4760091 | 1921395 ~ 1935499 (+) | True | LOC103036328 |
| TU84211 | other | downstream | 147336 | 6851230 ~ 6855762 (+) | True | G62455 |
| TU84764 | other | downstream | 1828865 | 8532759 ~ 8533232 (+) | False | LOC103041471 |
| TU84760 | other | downstream | 1829454 | 8533348 ~ 8540123 (+) | True | LOC103041471 |
| XR_002650190.1 | other | downstream | 2729543 | 9433437 ~ 9440564 (+) | False | LOC111192948 |
| TU85065 | other | downstream | 2942685 | 9646579 ~ 9650087 (+) | True | G63051 |
