Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022671373.1 |
| length | 2892 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 15 |
| gene id | LOC103030426 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035903.1 |
| NCBI id | CM008306.1 |
| chromosome length | 40813162 |
| location | 13544952 ~ 13557590 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0043401 | steroid hormone mediated signaling pathway | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0004879 | nuclear receptor activity | molecular_function |
| GO:0003707 | steroid hormone receptor activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K08543 | NR2C1, TR2; testicular receptor 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86005 | lncRNA | upstream | 3428 | 13542613 ~ 13543511 (+) | True | G63755 |
| TU86006 | lncRNA | upstream | 4938 | 13541161 ~ 13542001 (+) | True | G63756 |
| TU85987 | lncRNA | upstream | 37342 | 13451746 ~ 13509597 (+) | True | G63738 |
| TU86075 | lncRNA | downstream | 16130 | 13573720 ~ 13677259 (+) | True | G63791 |
| TU86106 | lncRNA | downstream | 154319 | 13711909 ~ 13713440 (+) | True | G63813 |
| TU86129 | lncRNA | downstream | 197275 | 13754865 ~ 13755370 (+) | True | G63827 |
| TU86260 | lncRNA | downstream | 609639 | 14167229 ~ 14242233 (+) | False | gata3 |
| TU86326 | lncRNA | downstream | 825292 | 14382882 ~ 14383150 (+) | True | G63978 |
| XM_007234965.3 | mRNA | upstream | 7889 | 13507378 ~ 13539050 (+) | True | fgd6 |
| XM_007234964.3 | mRNA | upstream | 101267 | 13433569 ~ 13445672 (+) | True | usp44 |
| XM_022671367.1 | mRNA | upstream | 150676 | 13386540 ~ 13396263 (+) | True | LOC103026035 |
| XM_022671368.1 | mRNA | upstream | 151370 | 13386538 ~ 13395569 (+) | False | LOC103026035 |
| XM_007234962.3 | mRNA | upstream | 165024 | 13369680 ~ 13381915 (+) | True | LOC103036201 |
| XM_007243321.3 | mRNA | downstream | 3846 | 13561436 ~ 13565100 (+) | True | ndufa12 |
| XM_007234970.3 | mRNA | downstream | 34022 | 13591612 ~ 13633235 (+) | True | tmcc3 |
| XM_007234969.2 | mRNA | downstream | 35526 | 13593116 ~ 13633235 (+) | False | tmcc3 |
| XM_015601793.2 | mRNA | downstream | 36266 | 13593856 ~ 13633235 (+) | False | tmcc3 |
| XM_007234978.3 | mRNA | downstream | 200738 | 13758328 ~ 13773588 (+) | False | rbm17 |
| TU85654 | other | upstream | 385619 | 13156226 ~ 13161320 (+) | False | LOC111192955 |
| trnag-gcc_1 | other | upstream | 887421 | 12659448 ~ 12659518 (+) | True | trnag-gcc_1 |
| TU85565 | other | upstream | 1078037 | 12468050 ~ 12468902 (+) | True | G63432 |
| TU85065 | other | upstream | 3896852 | 9646579 ~ 9650087 (+) | True | G63051 |
| XR_002650190.1 | other | upstream | 4106375 | 9433437 ~ 9440564 (+) | False | LOC111192948 |
| TU86374 | other | downstream | 1187145 | 14744735 ~ 14745082 (+) | True | G64015 |
| TU86778 | other | downstream | 2864644 | 16422234 ~ 16426613 (+) | False | arid2 |
| TU86763 | other | downstream | 2881630 | 16439220 ~ 16442449 (+) | True | G64289 |
| TU86945 | other | downstream | 3195453 | 16753043 ~ 16753560 (+) | True | G64431 |
| TU86961 | other | downstream | 3275706 | 16833296 ~ 16864454 (+) | False | LOC103030423 |
