Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007249064.3 |
| length | 1428 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 4 |
| gene id | hes1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035909.1 |
| NCBI id | CM008312.1 |
| chromosome length | 44161018 |
| location | 39209814 ~ 39211823 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0021794 | thalamus development | biological_process |
| GO:0007219 | Notch signaling pathway | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0001757 | somite specification | biological_process |
| GO:0045664 | regulation of neuron differentiation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046983 | protein dimerization activity | molecular_function |
| id | description |
|---|---|
| K06054 | HES1; hairy and enhancer of split 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU157976 | lncRNA | upstream | 58596 | 39150829 ~ 39151218 (+) | True | G116960 |
| TU157973 | lncRNA | upstream | 124914 | 39084679 ~ 39084900 (+) | True | G116957 |
| TU157880 | lncRNA | upstream | 226255 | 38980409 ~ 38983559 (+) | True | G116886 |
| TU157860 | lncRNA | upstream | 255003 | 38953227 ~ 38954811 (+) | True | G116869 |
| TU157843 | lncRNA | upstream | 581650 | 38626794 ~ 38628164 (+) | True | G116852 |
| TU157991 | lncRNA | downstream | 60074 | 39271897 ~ 39282073 (+) | True | G116975 |
| TU157997 | lncRNA | downstream | 72399 | 39284222 ~ 39285631 (+) | True | G116978 |
| TU157998 | lncRNA | downstream | 73884 | 39285707 ~ 39287709 (+) | True | G116979 |
| TU158011 | lncRNA | downstream | 113720 | 39325543 ~ 39325769 (+) | True | G116985 |
| TU158020 | lncRNA | downstream | 141612 | 39353435 ~ 39353788 (+) | True | G116994 |
| XM_022675822.1 | mRNA | upstream | 128703 | 39032127 ~ 39081111 (+) | True | opa1 |
| XM_007249068.2 | mRNA | upstream | 128703 | 39032127 ~ 39081111 (+) | False | opa1 |
| XM_007249069.2 | mRNA | upstream | 128703 | 39032127 ~ 39081111 (+) | False | opa1 |
| XM_007249086.3 | mRNA | upstream | 775957 | 38417049 ~ 38433857 (+) | True | cth |
| XM_007249083.2 | mRNA | upstream | 802517 | 38403349 ~ 38407297 (+) | True | nit2 |
| XM_022675824.1 | mRNA | downstream | 305677 | 39517500 ~ 39594023 (+) | True | LOC103022251 |
| XM_007249062.3 | mRNA | downstream | 742650 | 39954473 ~ 40009536 (+) | True | LOC103028032 |
| XM_022675826.1 | mRNA | downstream | 1012228 | 40224051 ~ 40259219 (+) | True | LOC103027818 |
| XM_007258376.3 | mRNA | downstream | 1061563 | 40273386 ~ 40276489 (+) | True | LOC103040699 |
| XM_007258375.3 | mRNA | downstream | 1106935 | 40318758 ~ 40339674 (+) | True | LOC103040381 |
| TU157374 | other | upstream | 2098216 | 37100014 ~ 37111598 (+) | False | LOC103045245 |
| XR_002650721.1 | other | upstream | 2495930 | 36657392 ~ 36713884 (+) | False | LOC103044253 |
| trnaf-gaa_2 | other | upstream | 2960969 | 36248773 ~ 36248845 (+) | True | trnaf-gaa_2 |
| TU156853 | other | upstream | 3221754 | 35982119 ~ 35988060 (+) | True | G116103 |
| TU156628 | other | upstream | 3475455 | 35730653 ~ 35734359 (+) | True | G115931 |
| TU158023 | other | downstream | 147048 | 39358871 ~ 39359388 (+) | True | G116997 |
| TU158258 | other | downstream | 1587648 | 40799471 ~ 40803543 (+) | False | LOC103033994 |
| TU158255 | other | downstream | 1587748 | 40799571 ~ 40803543 (+) | False | LOC103033994 |
| TU158846 | other | downstream | 3139984 | 42351807 ~ 42355784 (+) | True | G117642 |
| TU158848 | other | downstream | 3139984 | 42351807 ~ 42355784 (+) | False | G117642 |
