Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022675626.1 |
| length | 1311 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 7 |
| gene id | arfrp1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035909.1 |
| NCBI id | CM008312.1 |
| chromosome length | 44161018 |
| location | 28141928 ~ 28149421 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU154199 | lncRNA | upstream | 11636 | 28087744 ~ 28130292 (+) | False | G114127 |
| TU154198 | lncRNA | upstream | 11679 | 28066690 ~ 28130249 (+) | True | G114127 |
| TU154179 | lncRNA | upstream | 135579 | 28005507 ~ 28006349 (+) | True | G114110 |
| TU154065 | lncRNA | upstream | 475953 | 27661540 ~ 27665975 (+) | True | G114026 |
| TU154055 | lncRNA | upstream | 495778 | 27642654 ~ 27646150 (+) | True | G114020 |
| TU154231 | lncRNA | downstream | 22090 | 28171511 ~ 28171989 (+) | True | G114154 |
| TU154238 | lncRNA | downstream | 67786 | 28217207 ~ 28217435 (+) | True | G114159 |
| TU154259 | lncRNA | downstream | 148073 | 28297494 ~ 28297775 (+) | True | G114168 |
| TU154248 | lncRNA | downstream | 163219 | 28312640 ~ 28316397 (+) | True | G114162 |
| TU154316 | lncRNA | downstream | 255788 | 28405209 ~ 28455339 (+) | True | G114191 |
| XM_022675624.1 | mRNA | upstream | 14692 | 28041772 ~ 28127236 (+) | True | kcnq2 |
| XM_022675625.1 | mRNA | upstream | 14692 | 28041773 ~ 28127236 (+) | False | kcnq2 |
| XM_022675093.1 | mRNA | upstream | 119109 | 27976381 ~ 28022819 (+) | True | ralgapb |
| XM_022675620.1 | mRNA | upstream | 501565 | 27576234 ~ 27640363 (+) | True | snta1 |
| XM_022675092.1 | mRNA | upstream | 652406 | 27391014 ~ 27489522 (+) | True | LOC103037845 |
| XM_015606889.2 | mRNA | downstream | 4686 | 28154107 ~ 28167135 (+) | True | stmn3 |
| XM_007253413.3 | mRNA | downstream | 4690 | 28154111 ~ 28167135 (+) | False | stmn3 |
| XM_022675627.1 | mRNA | downstream | 23153 | 28172574 ~ 28198880 (+) | True | LOC103025927 |
| XM_022675628.1 | mRNA | downstream | 75238 | 28224659 ~ 28229015 (+) | True | sp7 |
| XM_022675629.1 | mRNA | downstream | 122400 | 28271821 ~ 28292098 (+) | True | LOC103025620 |
| TU154011 | other | upstream | 696982 | 27391029 ~ 27444946 (+) | False | LOC103037845 |
| TU153992 | other | upstream | 789484 | 27347449 ~ 27352444 (+) | True | G113979 |
| TU153993 | other | upstream | 789484 | 27347449 ~ 27352444 (+) | False | G113979 |
| TU153586 | other | upstream | 2799160 | 25342455 ~ 25342768 (+) | False | ube2o |
| TU153545 | other | upstream | 2879707 | 25261386 ~ 25262221 (+) | True | G113642 |
| TU154976 | other | downstream | 1976914 | 30126335 ~ 30129896 (+) | True | G114698 |
| TU155153 | other | downstream | 2700888 | 30850309 ~ 30880553 (+) | True | G114841 |
| TU155369 | other | downstream | 3743864 | 31893285 ~ 31894351 (+) | True | G115024 |
| TU155443 | other | downstream | 3979884 | 32129305 ~ 32134868 (+) | False | LOC103027407 |
| XR_002650704.1 | other | downstream | 4455536 | 32604957 ~ 32605732 (+) | True | LOC111193763 |
