Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007254252.3 |
| length | 1323 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 6 |
| gene id | tsfm |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035909.1 |
| NCBI id | CM008312.1 |
| chromosome length | 44161018 |
| location | 36446391 ~ 36449832 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006414 | translational elongation | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0003746 | translation elongation factor activity | molecular_function |
| id | description |
|---|---|
| K02357 | tsf, TSFM; elongation factor Ts |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU157016 | lncRNA | upstream | 102497 | 36342985 ~ 36343894 (+) | False | LOC103024058 |
| TU156931 | lncRNA | upstream | 139629 | 36306350 ~ 36306762 (+) | True | G116155 |
| TU156904 | lncRNA | upstream | 222813 | 36189774 ~ 36223578 (+) | True | G116138 |
| TU156858 | lncRNA | upstream | 446335 | 35990033 ~ 36000056 (+) | True | G116105 |
| TU156856 | lncRNA | upstream | 462702 | 35982119 ~ 35983689 (+) | False | G116103 |
| XR_002650720.1 | lncRNA | downstream | 51401 | 36501233 ~ 36503562 (+) | True | LOC111193778 |
| TU157176 | lncRNA | downstream | 282316 | 36732148 ~ 36742014 (+) | True | G116349 |
| TU157189 | lncRNA | downstream | 373632 | 36823464 ~ 36831576 (+) | True | G116359 |
| TU157186 | lncRNA | downstream | 375462 | 36825294 ~ 36827868 (+) | True | G116356 |
| TU157183 | lncRNA | downstream | 383657 | 36833489 ~ 36834522 (+) | True | G116353 |
| XM_007254254.2 | mRNA | upstream | 12547 | 36428470 ~ 36433844 (+) | True | sumf1 |
| XM_007254260.3 | mRNA | upstream | 86614 | 36343130 ~ 36359777 (+) | False | LOC103024058 |
| XM_007254259.3 | mRNA | upstream | 86614 | 36343979 ~ 36359777 (+) | False | LOC103024058 |
| XM_007254258.3 | mRNA | upstream | 86614 | 36350033 ~ 36359777 (+) | True | LOC103024058 |
| XM_022675762.1 | mRNA | upstream | 106365 | 36335569 ~ 36340026 (+) | True | LOC103023734 |
| XM_007254250.3 | mRNA | downstream | 1166 | 36450998 ~ 36458089 (+) | True | LOC103021650 |
| XM_007254251.3 | mRNA | downstream | 1166 | 36450998 ~ 36458089 (+) | False | LOC103021650 |
| XM_015607125.2 | mRNA | downstream | 109979 | 36559811 ~ 36576516 (+) | True | LOC103047611 |
| XM_015607126.2 | mRNA | downstream | 126786 | 36576618 ~ 36596744 (+) | True | LOC103047301 |
| XM_007254247.3 | mRNA | downstream | 126786 | 36576618 ~ 36596744 (+) | False | LOC103047301 |
| trnaf-gaa_2 | other | upstream | 197546 | 36248773 ~ 36248845 (+) | True | trnaf-gaa_2 |
| TU156853 | other | upstream | 458331 | 35982119 ~ 35988060 (+) | True | G116103 |
| TU156628 | other | upstream | 712032 | 35730653 ~ 35734359 (+) | True | G115931 |
| TU156626 | other | upstream | 712812 | 35730379 ~ 35733579 (+) | False | G115931 |
| XR_002650721.1 | other | downstream | 207560 | 36657392 ~ 36713884 (+) | False | LOC103044253 |
| TU157374 | other | downstream | 650182 | 37100014 ~ 37111598 (+) | False | LOC103045245 |
| TU158023 | other | downstream | 2909039 | 39358871 ~ 39359388 (+) | True | G116997 |
| TU158258 | other | downstream | 4349639 | 40799471 ~ 40803543 (+) | False | LOC103033994 |
| TU158255 | other | downstream | 4349739 | 40799571 ~ 40803543 (+) | False | LOC103033994 |
