Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022675749.1 |
| length | 1113 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC103026553 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035909.1 |
| NCBI id | CM008312.1 |
| chromosome length | 44161018 |
| location | 36047897 ~ 36050402 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0030947 | regulation of vascular endothelial growth factor receptor signaling pathway | biological_process |
| GO:0045765 | regulation of angiogenesis | biological_process |
| GO:0030218 | erythrocyte differentiation | biological_process |
| GO:0016567 | protein ubiquitination | biological_process |
| GO:0005634 | nucleus | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU156858 | lncRNA | upstream | 47842 | 35990033 ~ 36000056 (+) | True | G116105 |
| TU156856 | lncRNA | upstream | 64209 | 35982119 ~ 35983689 (+) | False | G116103 |
| TU156780 | lncRNA | upstream | 80020 | 35958543 ~ 35967878 (+) | False | tomm6 |
| TU156904 | lncRNA | downstream | 139372 | 36189774 ~ 36223578 (+) | True | G116138 |
| TU156931 | lncRNA | downstream | 255948 | 36306350 ~ 36306762 (+) | True | G116155 |
| TU157016 | lncRNA | downstream | 292583 | 36342985 ~ 36343894 (+) | False | LOC103024058 |
| TU157052 | lncRNA | downstream | 366406 | 36416808 ~ 36462597 (+) | True | G116255 |
| XR_002650720.1 | lncRNA | downstream | 450831 | 36501233 ~ 36503562 (+) | True | LOC111193778 |
| XM_007254266.3 | mRNA | upstream | 985 | 36039192 ~ 36046913 (+) | True | crbn |
| XM_007254286.3 | mRNA | upstream | 86094 | 35958630 ~ 35961804 (+) | False | tomm6 |
| XM_007254288.3 | mRNA | upstream | 92356 | 35952041 ~ 35955542 (+) | True | tspo |
| XM_022675750.1 | mRNA | upstream | 92356 | 35953216 ~ 35955542 (+) | False | tspo |
| XM_007254293.3 | mRNA | upstream | 141880 | 35901223 ~ 35906018 (+) | True | ppil1 |
| XM_022675739.1 | mRNA | downstream | 108 | 36050510 ~ 36056356 (+) | True | tatdn2 |
| XM_022675742.1 | mRNA | downstream | 108 | 36050510 ~ 36056356 (+) | False | tatdn2 |
| XM_007254270.3 | mRNA | downstream | 108 | 36050510 ~ 36056356 (+) | False | tatdn2 |
| XM_022675744.1 | mRNA | downstream | 108 | 36050510 ~ 36056356 (+) | False | tatdn2 |
| XM_022675741.1 | mRNA | downstream | 108 | 36050510 ~ 36056356 (+) | False | tatdn2 |
| TU156853 | other | upstream | 59838 | 35982119 ~ 35988060 (+) | True | G116103 |
| TU156628 | other | upstream | 313539 | 35730653 ~ 35734359 (+) | True | G115931 |
| TU156626 | other | upstream | 314319 | 35730379 ~ 35733579 (+) | False | G115931 |
| TU156625 | other | upstream | 314319 | 35730653 ~ 35733579 (+) | False | G115931 |
| TU156582 | other | upstream | 371863 | 35674648 ~ 35676035 (+) | True | G115917 |
| trnaf-gaa_2 | other | downstream | 198371 | 36248773 ~ 36248845 (+) | True | trnaf-gaa_2 |
| XR_002650721.1 | other | downstream | 606990 | 36657392 ~ 36713884 (+) | False | LOC103044253 |
| TU157374 | other | downstream | 1049612 | 37100014 ~ 37111598 (+) | False | LOC103045245 |
| TU158023 | other | downstream | 3308469 | 39358871 ~ 39359388 (+) | True | G116997 |
| TU158258 | other | downstream | 4749069 | 40799471 ~ 40803543 (+) | False | LOC103033994 |
