Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU266983 |
| length | 830 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G196727 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035919.1 |
| NCBI id | CM008322.1 |
| chromosome length | 38085671 |
| location | 11042954 ~ 11048830 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU266976 | lncRNA | upstream | 12670 | 11029130 ~ 11030284 (+) | False | samd14 |
| TU266967 | lncRNA | upstream | 85917 | 10956010 ~ 10957037 (+) | True | G196712 |
| TU266957 | lncRNA | upstream | 136729 | 10904056 ~ 10906225 (+) | True | G196702 |
| TU266910 | lncRNA | upstream | 179700 | 10859375 ~ 10863254 (+) | False | G196684 |
| TU266912 | lncRNA | upstream | 181416 | 10846724 ~ 10861538 (+) | False | G196684 |
| TU266985 | lncRNA | downstream | 6535 | 11050464 ~ 11051863 (+) | True | G196728 |
| TU267030 | lncRNA | downstream | 296978 | 11340907 ~ 11341624 (+) | True | G196759 |
| TU267034 | lncRNA | downstream | 312608 | 11356537 ~ 11359180 (+) | True | G196762 |
| TU267235 | lncRNA | downstream | 418798 | 11462727 ~ 11483867 (+) | True | G196914 |
| TU267239 | lncRNA | downstream | 442888 | 11486817 ~ 11487100 (+) | True | G196918 |
| XM_007230774.2 | mRNA | upstream | 11685 | 11011041 ~ 11031269 (+) | False | samd14 |
| XM_022683041.1 | mRNA | upstream | 11685 | 11011041 ~ 11031269 (+) | False | samd14 |
| XM_007230775.3 | mRNA | upstream | 11685 | 11011190 ~ 11031269 (+) | True | samd14 |
| XM_007230772.3 | mRNA | upstream | 35375 | 10982584 ~ 11007579 (+) | True | LOC103036776 |
| XM_007230773.3 | mRNA | upstream | 35375 | 10982586 ~ 11007579 (+) | False | LOC103036776 |
| XM_007230779.3 | mRNA | downstream | 8789 | 11052718 ~ 11062046 (+) | True | ankle1 |
| XM_007230782.3 | mRNA | downstream | 64112 | 11108041 ~ 11115372 (+) | True | LOC103039714 |
| XM_015607951.2 | mRNA | downstream | 64113 | 11108042 ~ 11115372 (+) | False | LOC103039714 |
| XM_015608019.2 | mRNA | downstream | 156368 | 11200297 ~ 11239603 (+) | True | cdk12 |
| XM_007230786.3 | mRNA | downstream | 156368 | 11200297 ~ 11239603 (+) | False | cdk12 |
| TU266794 | other | upstream | 550853 | 10491546 ~ 10492101 (+) | True | G196633 |
| trnap-agg_20 | other | upstream | 815151 | 10227734 ~ 10227803 (+) | True | trnap-agg_20 |
| trnap-agg_19 | other | upstream | 815460 | 10227422 ~ 10227494 (+) | True | trnap-agg_19 |
| trnap-agg_18 | other | upstream | 815778 | 10227106 ~ 10227176 (+) | True | trnap-agg_18 |
| trnap-agg_17 | other | upstream | 817254 | 10225630 ~ 10225700 (+) | True | trnap-agg_17 |
| TU267213 | other | downstream | 358265 | 11402194 ~ 11417588 (+) | False | mrpl24 |
| TU267214 | other | downstream | 358265 | 11402194 ~ 11417588 (+) | False | mrpl24 |
| TU267531 | other | downstream | 1671439 | 12715368 ~ 12774496 (+) | True | G197106 |
| TU267630 | other | downstream | 1845429 | 12889358 ~ 12928524 (+) | True | LOC103029421 |
| TU267673 | other | downstream | 1912931 | 12956860 ~ 12964344 (+) | False | s100a14 |
