Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU266985 |
| length | 389 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 2 |
| gene id | G196728 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035919.1 |
| NCBI id | CM008322.1 |
| chromosome length | 38085671 |
| location | 11050464 ~ 11051863 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | description |
|---|---|
| ko03040 | Spliceosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU266984 | lncRNA | upstream | 1634 | 11042954 ~ 11048830 (+) | True | G196727 |
| TU266983 | lncRNA | upstream | 6535 | 11042954 ~ 11043929 (+) | False | G196727 |
| TU266976 | lncRNA | upstream | 20180 | 11029130 ~ 11030284 (+) | False | samd14 |
| TU266967 | lncRNA | upstream | 93427 | 10956010 ~ 10957037 (+) | True | G196712 |
| TU266957 | lncRNA | upstream | 144239 | 10904056 ~ 10906225 (+) | True | G196702 |
| TU267030 | lncRNA | downstream | 289044 | 11340907 ~ 11341624 (+) | True | G196759 |
| TU267034 | lncRNA | downstream | 304674 | 11356537 ~ 11359180 (+) | True | G196762 |
| TU267235 | lncRNA | downstream | 410864 | 11462727 ~ 11483867 (+) | True | G196914 |
| TU267239 | lncRNA | downstream | 434954 | 11486817 ~ 11487100 (+) | True | G196918 |
| TU267247 | lncRNA | downstream | 441714 | 11493577 ~ 11500681 (+) | False | G196923 |
| XM_007230774.2 | mRNA | upstream | 19195 | 11011041 ~ 11031269 (+) | False | samd14 |
| XM_022683041.1 | mRNA | upstream | 19195 | 11011041 ~ 11031269 (+) | False | samd14 |
| XM_007230775.3 | mRNA | upstream | 19195 | 11011190 ~ 11031269 (+) | True | samd14 |
| XM_007230772.3 | mRNA | upstream | 42885 | 10982584 ~ 11007579 (+) | True | LOC103036776 |
| XM_007230779.3 | mRNA | downstream | 855 | 11052718 ~ 11062046 (+) | True | ankle1 |
| XM_007230782.3 | mRNA | downstream | 56178 | 11108041 ~ 11115372 (+) | True | LOC103039714 |
| XM_015607951.2 | mRNA | downstream | 56179 | 11108042 ~ 11115372 (+) | False | LOC103039714 |
| XM_015608019.2 | mRNA | downstream | 148434 | 11200297 ~ 11239603 (+) | True | cdk12 |
| XM_007230786.3 | mRNA | downstream | 148434 | 11200297 ~ 11239603 (+) | False | cdk12 |
| TU266794 | other | upstream | 558363 | 10491546 ~ 10492101 (+) | True | G196633 |
| trnap-agg_20 | other | upstream | 822661 | 10227734 ~ 10227803 (+) | True | trnap-agg_20 |
| trnap-agg_19 | other | upstream | 822970 | 10227422 ~ 10227494 (+) | True | trnap-agg_19 |
| trnap-agg_18 | other | upstream | 823288 | 10227106 ~ 10227176 (+) | True | trnap-agg_18 |
| trnap-agg_17 | other | upstream | 824764 | 10225630 ~ 10225700 (+) | True | trnap-agg_17 |
| TU267213 | other | downstream | 350331 | 11402194 ~ 11417588 (+) | False | mrpl24 |
| TU267214 | other | downstream | 350331 | 11402194 ~ 11417588 (+) | False | mrpl24 |
| TU267531 | other | downstream | 1663505 | 12715368 ~ 12774496 (+) | True | G197106 |
| TU267630 | other | downstream | 1837495 | 12889358 ~ 12928524 (+) | True | LOC103029421 |
| TU267673 | other | downstream | 1904997 | 12956860 ~ 12964344 (+) | False | s100a14 |
