Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU270447 |
| length | 807 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G199197 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035919.1 |
| NCBI id | CM008322.1 |
| chromosome length | 38085671 |
| location | 22703511 ~ 22704656 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0031667 | response to nutrient levels | biological_process |
| GO:0009991 | response to extracellular stimulus | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU270440 | lncRNA | upstream | 19075 | 22679107 ~ 22684436 (+) | True | G199192 |
| TU270365 | lncRNA | upstream | 217748 | 22479853 ~ 22485763 (+) | True | G199145 |
| TU270362 | lncRNA | upstream | 221895 | 22477548 ~ 22481616 (+) | False | G199145 |
| XR_002651711.1 | lncRNA | upstream | 281135 | 22414247 ~ 22422376 (+) | True | LOC111195530 |
| TU270352 | lncRNA | upstream | 310946 | 22391366 ~ 22392565 (+) | True | G199137 |
| TU270453 | lncRNA | downstream | 1830 | 22706486 ~ 22709232 (+) | True | G199202 |
| TU270497 | lncRNA | downstream | 162872 | 22867528 ~ 22869241 (+) | False | znf704 |
| TU270498 | lncRNA | downstream | 166419 | 22871075 ~ 22878356 (+) | True | G199240 |
| TU270499 | lncRNA | downstream | 166419 | 22871075 ~ 22878356 (+) | False | G199240 |
| TU270504 | lncRNA | downstream | 175995 | 22880651 ~ 22885237 (+) | True | G199243 |
| XM_007249323.3 | mRNA | upstream | 229302 | 22459246 ~ 22474209 (+) | True | LOC103024228 |
| XM_022683183.1 | mRNA | upstream | 244633 | 22448746 ~ 22458878 (+) | True | fuca1 |
| XM_015605832.2 | mRNA | upstream | 244633 | 22448747 ~ 22458878 (+) | False | fuca1 |
| XM_007249322.3 | mRNA | upstream | 244633 | 22452551 ~ 22458878 (+) | False | fuca1 |
| XM_007249324.3 | mRNA | upstream | 258356 | 22438713 ~ 22445155 (+) | True | zbtb8b |
| XM_022683184.1 | mRNA | downstream | 9503 | 22714159 ~ 22777841 (+) | True | LOC111195531 |
| XM_022683185.1 | mRNA | downstream | 21032 | 22725688 ~ 22777841 (+) | False | LOC111195531 |
| XM_022683186.1 | mRNA | downstream | 107113 | 22811769 ~ 22828432 (+) | True | LOC103021724 |
| XM_007249311.3 | mRNA | downstream | 125575 | 22830231 ~ 22869257 (+) | True | znf704 |
| XM_007249313.3 | mRNA | downstream | 125575 | 22830231 ~ 22869257 (+) | False | znf704 |
| TU270302 | other | upstream | 480475 | 22219265 ~ 22223036 (+) | True | G199091 |
| XR_002651708.1 | other | upstream | 1320511 | 21358464 ~ 21383000 (+) | False | LOC103037930 |
| TU269957 | other | upstream | 1900621 | 20802371 ~ 20802890 (+) | True | G198815 |
| TU269770 | other | upstream | 2614524 | 20053157 ~ 20088987 (+) | True | fndc5 |
| XR_454777.3 | other | upstream | 2625216 | 20053051 ~ 20078295 (+) | False | fndc5 |
| TU271111 | other | downstream | 2913272 | 25617928 ~ 25620129 (+) | True | ndufs5 |
| TU271109 | other | downstream | 2913378 | 25618034 ~ 25620129 (+) | False | ndufs5 |
| TU271110 | other | downstream | 2913378 | 25618034 ~ 25620129 (+) | False | ndufs5 |
| TU271396 | other | downstream | 3905773 | 26610429 ~ 26613182 (+) | False | c23h18orf21 |
| TU271651 | other | downstream | 4579564 | 27284220 ~ 27284567 (+) | True | G200104 |
