Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU270978 |
| length | 1238 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 8 |
| gene id | G199625 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035919.1 |
| NCBI id | CM008322.1 |
| chromosome length | 38085671 |
| location | 25083984 ~ 25299692 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU270940 | lncRNA | upstream | 645945 | 24437805 ~ 24438039 (+) | True | G199588 |
| TU270883 | lncRNA | upstream | 863370 | 24220361 ~ 24220614 (+) | True | G199546 |
| TU270797 | lncRNA | upstream | 910058 | 24121268 ~ 24173926 (+) | True | G199469 |
| TU270745 | lncRNA | upstream | 1298025 | 23782931 ~ 23785959 (+) | True | G199424 |
| TU270761 | lncRNA | upstream | 1313520 | 23769396 ~ 23770464 (+) | True | G199436 |
| TU271032 | lncRNA | downstream | 8950 | 25308642 ~ 25308947 (+) | True | G199669 |
| TU271049 | lncRNA | downstream | 77705 | 25377397 ~ 25378146 (+) | True | G199683 |
| TU271050 | lncRNA | downstream | 78887 | 25378579 ~ 25378825 (+) | True | G199684 |
| TU271061 | lncRNA | downstream | 217205 | 25516897 ~ 25548341 (+) | True | G199691 |
| TU271134 | lncRNA | downstream | 624527 | 25924219 ~ 25925193 (+) | True | G199739 |
| XM_022683200.1 | mRNA | upstream | 8193 | 24648033 ~ 25075791 (+) | True | csmd2 |
| XM_007249264.3 | mRNA | upstream | 832595 | 24241364 ~ 24251389 (+) | True | LOC103034043 |
| XM_007249265.2 | mRNA | upstream | 1134991 | 23942554 ~ 23948993 (+) | True | ilf2 |
| XM_007249266.2 | mRNA | upstream | 1134991 | 23942554 ~ 23948993 (+) | False | ilf2 |
| XM_007249268.2 | mRNA | upstream | 1151944 | 23898683 ~ 23932040 (+) | True | hpcal4 |
| XM_015608266.2 | mRNA | downstream | 70809 | 25370501 ~ 25377202 (+) | True | trappc3 |
| XM_022683203.1 | mRNA | downstream | 116876 | 25416568 ~ 25526086 (+) | True | col8a2 |
| XM_015608253.2 | mRNA | downstream | 116876 | 25416568 ~ 25526086 (+) | False | col8a2 |
| XM_022683204.1 | mRNA | downstream | 229712 | 25529404 ~ 25560124 (+) | True | LOC103042327 |
| XM_007258808.3 | mRNA | downstream | 229712 | 25529404 ~ 25560124 (+) | False | LOC103042327 |
| TU270302 | other | upstream | 2860948 | 22219265 ~ 22223036 (+) | True | G199091 |
| XR_002651708.1 | other | upstream | 3700984 | 21358464 ~ 21383000 (+) | False | LOC103037930 |
| TU269957 | other | upstream | 4281094 | 20802371 ~ 20802890 (+) | True | G198815 |
| TU269770 | other | upstream | 4994997 | 20053157 ~ 20088987 (+) | True | fndc5 |
| XR_454777.3 | other | upstream | 5005689 | 20053051 ~ 20078295 (+) | False | fndc5 |
| TU271111 | other | downstream | 318236 | 25617928 ~ 25620129 (+) | True | ndufs5 |
| TU271109 | other | downstream | 318342 | 25618034 ~ 25620129 (+) | False | ndufs5 |
| TU271110 | other | downstream | 318342 | 25618034 ~ 25620129 (+) | False | ndufs5 |
| TU271396 | other | downstream | 1310737 | 26610429 ~ 26613182 (+) | False | c23h18orf21 |
| TU271651 | other | downstream | 1984528 | 27284220 ~ 27284567 (+) | True | G200104 |
