Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007245753.3 |
| length | 1312 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | med30 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035919.1 |
| NCBI id | CM008322.1 |
| chromosome length | 38085671 |
| location | 31224444 ~ 31257722 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU273011 | lncRNA | upstream | 139840 | 31009926 ~ 31084604 (+) | False | rbm24 |
| TU273008 | lncRNA | upstream | 194555 | 31018604 ~ 31029889 (+) | True | G201019 |
| TU273026 | lncRNA | upstream | 218519 | 31005632 ~ 31005925 (+) | True | G201030 |
| TU272988 | lncRNA | upstream | 414218 | 30809995 ~ 30810226 (+) | True | G201010 |
| TU272986 | lncRNA | upstream | 476242 | 30748003 ~ 30748202 (+) | True | G201008 |
| TU273150 | lncRNA | downstream | 2223 | 31259945 ~ 31262960 (+) | True | G201135 |
| TU273187 | lncRNA | downstream | 183723 | 31441445 ~ 31445123 (+) | False | G201163 |
| TU273188 | lncRNA | downstream | 183723 | 31441445 ~ 31451756 (+) | True | G201163 |
| TU273192 | lncRNA | downstream | 290627 | 31548349 ~ 31631753 (+) | True | G201167 |
| TU273237 | lncRNA | downstream | 681779 | 31939501 ~ 31939940 (+) | True | G201206 |
| XM_007245752.3 | mRNA | upstream | 5526 | 31191756 ~ 31218918 (+) | True | LOC103030437 |
| XM_007245745.2 | mRNA | upstream | 37343 | 31164226 ~ 31187101 (+) | True | grina |
| XM_007245744.2 | mRNA | upstream | 37343 | 31164226 ~ 31187101 (+) | False | grina |
| XM_007245746.3 | mRNA | upstream | 62086 | 31150860 ~ 31162358 (+) | True | mapk15 |
| XM_022683327.1 | mRNA | upstream | 62086 | 31150860 ~ 31162358 (+) | False | mapk15 |
| XM_007247888.2 | mRNA | downstream | 795993 | 32053715 ~ 32067640 (+) | True | tpmt |
| XM_007247882.3 | mRNA | downstream | 813923 | 32071645 ~ 32180536 (+) | True | LOC103047171 |
| XM_007247885.3 | mRNA | downstream | 929435 | 32187157 ~ 32193783 (+) | True | ncdn |
| XM_007247887.3 | mRNA | downstream | 929531 | 32187253 ~ 32193783 (+) | False | ncdn |
| XM_007247880.3 | mRNA | downstream | 938493 | 32196215 ~ 32211930 (+) | False | tfap2e |
| TU273004 | other | upstream | 209399 | 31012711 ~ 31015045 (+) | True | G201018 |
| TU273012 | other | upstream | 212279 | 31009926 ~ 31012165 (+) | False | rbm24 |
| TU272690 | other | upstream | 1671561 | 29551136 ~ 29552883 (+) | False | eloa |
| TU271959 | other | upstream | 3028246 | 28193574 ~ 28196198 (+) | True | G200341 |
| TU271914 | other | upstream | 3241094 | 27981513 ~ 27983350 (+) | False | LOC103032101 |
| trnaq-uug_6 | other | downstream | 172825 | 31430547 ~ 31430618 (+) | True | trnaq-uug_6 |
| trnar-acg_20 | other | downstream | 173229 | 31430951 ~ 31431023 (+) | True | trnar-acg_20 |
| trnaq-cug_18 | other | downstream | 173519 | 31431241 ~ 31431312 (+) | True | trnaq-cug_18 |
| trnaq-cug_19 | other | downstream | 173849 | 31431571 ~ 31431642 (+) | True | trnaq-cug_19 |
| trnaq-cug_20 | other | downstream | 174182 | 31431904 ~ 31431975 (+) | True | trnaq-cug_20 |
