RNA id: XM_007249360.3


Basic Information

Item Value
RNA id XM_007249360.3
length 1057
RNA type mRNA
GC content 0.49
exon number 9
gene id fam92a
representative False

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 21860578 ~ 21872452 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GTACCTCCAACGCCATGGAAACGGCGGACGGCGTCCGTTTCTCTCGAAGCTAAAAATCATCACCCAGAGAAAATATACATCAGCGGGATCCTTTAAATCACTCAGTCCTTTAAAACTCACAGCCGCCGGCCGGAGACACCATGAACCGAAATCCAGACGCGCGGATAAGGGACACACAAACCAAGCAGATCCAGGAGAGCATCACCCATGTGGAGAAACACTTCGGAGACTTGTGCCAACTCTTTGCAGGATATGTTCGTAAAACTGCCCGTCTGAGGGACAAAGCCGATCTGTTGGTTAAGGAAGTCAGCCAGTATGCAGACACAGAAACACCTAACTTAAAACATGGACTGAAGAATTTTGCAGACCAGCTTGCCAAGATTCAGGACTATCGCCAAGCAGAGGTGGAAAGACTGGAAGCTAAAGTTGTTGAGCCGTTGAAAACCTATGGCTCTGTTGTGAAAATGAAAAGGGCAGACCTGAAGCTGACCCAGACCGCTCGGAACCGAGAGGCAAAGCAGATGCAGCAGCTGGAGAGAATGAGGCAGAGAAACCCCTCAGACAGGCAGATCATTTCACAGGCTGAGAGCGAACTCCAGAGAGCCACAATGGATGCCACGCGCACGACTCGCCAACTGGAGGAGACAATAGACGTGTTTGAAAGGCAGAAGATTCAGGATATCAAGAAAATCTTTATGGACTTTGTGAGTGTAGAGATGATCTTCCACGCCAAAGCTCTGGAGCTGTACACTACTGCCTATCAGCACATCCAGAATGTTGATGAGGAGGGCGATCTAGAGGTATTCAGGACCTCGCTGCACCCTCCTGACTATCAGTCTCGTTTAGACATAGTCCGTGCTAATTCCAGAACATCCTTGAACCGAACTGGAACATCCATGAGCAAATCCGGGACGTTGCAGTCGAGGAATCCAGCATCACAGGGGAAAAGGGAcgatgatgaggatgaggacgatgatgatgatgatgatgaagaggatgaggatgaggattTGGAGGATGTTACAGATGAGGAGAATTAAACTGAGTATAAGCAGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU270134 lncRNA upstream 18750 21820975 ~ 21841828 (+) True G198968
TU270131 lncRNA upstream 54839 21805474 ~ 21805739 (+) True G198965
TU270113 lncRNA upstream 203814 21656416 ~ 21656764 (+) True G198947
TU270109 lncRNA upstream 240733 21619638 ~ 21619845 (+) True G198943
TU270105 lncRNA upstream 299363 21561002 ~ 21561215 (+) True G198939
TU270181 lncRNA downstream 119080 21991532 ~ 21991627 (+) True G199006
TU270254 lncRNA downstream 324214 22196666 ~ 22200711 (+) True G199056
TU270249 lncRNA downstream 325326 22197778 ~ 22200711 (+) False G199056
TU270250 lncRNA downstream 325326 22197778 ~ 22200711 (+) False G199056
TU270251 lncRNA downstream 325326 22197778 ~ 22199041 (+) False G199056
XM_022683173.1 mRNA upstream 454389 21401489 ~ 21406189 (+) True lrrc69
XM_007249369.3 mRNA upstream 465050 21390138 ~ 21395528 (+) True otud6b
XM_022683172.1 mRNA upstream 465050 21391713 ~ 21395528 (+) False otud6b
XM_007249374.3 mRNA upstream 477578 21358464 ~ 21383000 (+) True LOC103037930
XM_007249359.3 mRNA downstream 59344 21931796 ~ 21944254 (+) True LOC103033932
XM_007249346.3 mRNA downstream 162733 22035185 ~ 22042547 (+) True LOC103030765
NM_001292029.1 mRNA downstream 269004 22141456 ~ 22148362 (+) True azin1b
XM_007249340.3 mRNA downstream 277917 22150369 ~ 22159424 (+) True LOC103028967
XM_022683442.1 mRNA downstream 288357 22160809 ~ 22169858 (+) True mtdh
XR_002651708.1 other upstream 477578 21358464 ~ 21383000 (+) False LOC103037930
TU269957 other upstream 1057688 20802371 ~ 20802890 (+) True G198815
TU269770 other upstream 1771591 20053157 ~ 20088987 (+) True fndc5
XR_454777.3 other upstream 1782283 20053051 ~ 20078295 (+) False fndc5
TU269618 other upstream 2613182 19246972 ~ 19247396 (+) True G198540
TU270302 other downstream 346813 22219265 ~ 22223036 (+) True G199091
TU271111 other downstream 3745476 25617928 ~ 25620129 (+) True ndufs5
TU271109 other downstream 3745582 25618034 ~ 25620129 (+) False ndufs5
TU271110 other downstream 3745582 25618034 ~ 25620129 (+) False ndufs5
TU271396 other downstream 4737977 26610429 ~ 26613182 (+) False c23h18orf21

Expression Profile