RNA id: XM_007258839.3



Basic Information


Item Value
RNA id XM_007258839.3
length 1000
RNA type mRNA
GC content 0.53
exon number 7
gene id ak2
representative False

Chromosome Information


Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 25580988 ~ 25587640 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


GACCGGGAGACGGTCTGCGCTTCCTCTTCTGGTTTGAGTTGGCAGGCTGGAAGTTCTCCACAGGGTCTGAGCTCCACAGCGCGGTGTCCACACTGACCACCATGGCCCCCAGCTCCCAGGCGGATGAGGTGGTCTCCGGCGTGCGGAAAGGCATCAGGGCCATCCTGTTAGGACCCCCCGGAGCGGGGAAGGGAACTCAGGCTCCCCGGCTGGCAGAGAAGTTCTGTGTGTGTCATCTGGCCACTGGGGACATGCTGAGGGCAATGGTGGCCTCTGGATCTGAACTTGGCCAGAGACTAAAACAGACCATGGATGCTGGCAAACTGGTGAGTGATGAGATGGTGGTCGAGCTTATAGAGAAGAACCTGGACACCCCTCCCTGTAAGAATGGCTTTTTATTGGATGGGTTTCCCCGCACAGtcaaacaagcagaaatgTTGGATGATCTGCTTGACAAACGCACAGAGAAGCTGGATTCCGTTGTTGAGTTCTCTGTGGATGACTCTCTCCTGGTGCGCAGAATCTGTGGAAGACTCATTCATCAGCCCAGTGGTCGTTCCTACCATGAGGAGTTTAACCCACCCAAGGAACACATGAAGGATGATGTAACCGGTGAGCCTTTGTCCCGCCGTAGCGATGACAACGAGAACACCCTGCGCTCGCGGCTGGAGTCCTACCACAGACAGACGGCCCCCCTGGTCGAGTACTATAGTGCACGTGGTTTGCACCGTGCCGTCGACGCTTCTCTGTCACCGGACCTCGTGTTTGCCTCCATCCTTGCTGCTTTCTCAGCTGCCACCTCTGTTTGAATCCCTGCATCGAACATCCAGTCTGGTCCAGATGATTCAAAAAGGGCGAGGTTGTCTAATAGAGCGTAATTTAATTGTGCTGAATAGTTAGTGTGCTTTATTTCAGGCACTCTGCCAGGACtgaaacacacaatacactggCCCTGATGACACTTCTtttgaaataaagaaacattttctACATGTCTTCA

Function


GO:

id name namespace
GO:0002521 leukocyte differentiation biological_process
GO:0046939 nucleotide phosphorylation biological_process
GO:0006172 ADP biosynthetic process biological_process
GO:0005758 mitochondrial intermembrane space cellular_component
GO:0005524 ATP binding molecular_function
GO:0004017 adenylate kinase activity molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU271061 lncRNA upstream 32647 25516897 ~ 25548341 (+) True G199691
TU271050 lncRNA upstream 202163 25378579 ~ 25378825 (+) True G199684
TU271049 lncRNA upstream 202842 25377397 ~ 25378146 (+) True G199683
TU271032 lncRNA upstream 272041 25308642 ~ 25308947 (+) True G199669
XR_002651734.1 lncRNA upstream 280132 25297043 ~ 25300856 (+) False LOC103041709
TU271134 lncRNA downstream 336579 25924219 ~ 25925193 (+) True G199739
TU271135 lncRNA downstream 336579 25924219 ~ 25924536 (+) False G199739
TU271136 lncRNA downstream 337274 25924914 ~ 25925193 (+) False G199739
TU271137 lncRNA downstream 337274 25924914 ~ 25925353 (+) False G199739
TU271139 lncRNA downstream 342284 25929924 ~ 25930410 (+) True G199741
XM_022683205.1 mRNA upstream 1596 25567672 ~ 25579392 (+) True anln
XM_022683207.1 mRNA upstream 1596 25567672 ~ 25579392 (+) False anln
XM_022683206.1 mRNA upstream 1596 25567672 ~ 25579392 (+) False anln
XM_022683204.1 mRNA upstream 20864 25529404 ~ 25560124 (+) True LOC103042327
XM_015608261.2 mRNA downstream 1908 25589548 ~ 25614781 (+) False rnf19b
XM_007258836.3 mRNA downstream 5622 25593262 ~ 25614781 (+) True rnf19b
XM_007258832.3 mRNA downstream 30376 25618016 ~ 25620135 (+) False ndufs5
XM_007258834.3 mRNA downstream 30418 25618058 ~ 25620135 (+) False ndufs5
XM_022683209.1 mRNA downstream 36917 25624557 ~ 25848463 (+) True macf1
TU270302 other upstream 3357952 22219265 ~ 22223036 (+) True G199091
XR_002651708.1 other upstream 4197988 21358464 ~ 21383000 (+) False LOC103037930
TU269957 other upstream 4778098 20802371 ~ 20802890 (+) True G198815
TU269770 other upstream 5492001 20053157 ~ 20088987 (+) True fndc5
XR_454777.3 other upstream 5502693 20053051 ~ 20078295 (+) False fndc5
TU271111 other downstream 30288 25617928 ~ 25620129 (+) True ndufs5
TU271109 other downstream 30394 25618034 ~ 25620129 (+) False ndufs5
TU271110 other downstream 30394 25618034 ~ 25620129 (+) False ndufs5
TU271396 other downstream 1022789 26610429 ~ 26613182 (+) False c23h18orf21
TU271651 other downstream 1696580 27284220 ~ 27284567 (+) True G200104

Expression Profile