RNA id: XM_022683251.1


Basic Information

Item Value
RNA id XM_022683251.1
length 2986
RNA type mRNA
GC content 0.46
exon number 10
gene id fbxl2
representative True

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 28784642 ~ 28802718 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

tcAGGGGCGTGTGGTGGAGAACATTTCAAAGAGATGCGGTGGTTTTCTTAGGCAGCTGAGTCTGAGAGGCTGTCTAAGTGTGGGTGATGCTTCAATGAAGACTTTTGCTCAGAACTGTCGCAACATAGAGCAGTTGAACCTGAATGGCTGCACTAAGATTACAGATTCGACATGCATCAGCCTCAGCAAATTCTGCTCCAAACTCCGCAACCTCGACCTGACTTCCTGCGTATCCATCACCAACCATGCTCTCAAGGCCTTaagTGAGGGCTGCCGGATGCTGGAGAATCTGAACCTGTCCTGGTGTGATCAGATCACGCGTGATGGCATTGAAGCACTCAGCCGTGGCTGCAATGGCCTCAAAGCACTGTTCCTTAGAGGCTgcacacagtTGGACGATACTGCACTGAAGCACCTTCAGAAGCATTGTCCGGAGCTTGTGACAATCAACATGCAATCCTGCACACAAATAACAGATGAGGGCTTTGTGAGTTTGTGTCGAGGGTGTCACAAGCTGcagatggtgtgtgtgtctggttgCAGCAACATCACAGACGCCTCTCTGACTGCACTGGGCCTCAACTGCCAACGGCTAAAGATTCTGGAGGCGGCCCGCTGCTCTCATGTGACAGATGCTGGTTTTACTGTTCTGGCGAGGaattGTCATGAAATGGAGAAAATGGATTTGGAAGAATGTATTTTGGTGACTGATAACACACTGGTCCAGCTTTCAATACACTGCCCTCGGCTTCAGGCCCTGaGCCTCTCGCATTGTGAGCTGATAACAGACGATGGGATCAGACACctgagcagcagtgtgtgtggtcaggAGCGGCTGCAGGTGGTGGAGCTGGATAACTGCCCCCTGATCACAGACATCACTCTGGAGCATCTGAAGAGCTGCCAGCGCCTCGAGCGCATCGAACTCTACGACTGCCAGCAGGTCACTCGCGCGGGAATCAAGCGCATTCGGGCCCACCTCCCGGAGATTAAAGTCCATGCCTACTTCGCTCCAGTGACGCCCCCTCCCTCAGTACACGGAGGAGGCCAGCGACTCTGCCGCTGCTGCGTCATACTCTGACAGAGGGTTGGCTTTTTGAGGGACCCCGTAGAGAGTGGAGCTGTCAGTCAACCTCTCAACCCAACCCTGGTCCTGCTGGACACCACGGCTAAACTCTACCCAAGGGTGTGGCTGTGGAAGGCCTGGTTTCTTCACTGAGTGTTTGCCTGGCAGCAGGATGGAGCTACACAAGTTTCACGAGCTACAAATGCAAAATACAACTCAAAACATGAAATCTGAATTTTTTCATACAGTACGATATACAGTCAGATATATGAGAAGAATGTGGAACAGCCACcctgtaaaatatttcacatttggatctacagaagaaaaaaaaacacatacacacataaacacattctCATTTGTGGAAGAACCTTATGCAGTATGATCTGGAACTGCTGACTGCGAACCTTGTCTGTGTGCGATGCCCCCTACCCCGGGGGGCTCAGTGACAACCGGACAGTGTTTACTTCTTGCTCCTCTCTGTCACCGATAAGAAAAAATGCATTCCCTCGCAAAGGGAACCAGTAGATTACCAGTATGAGCAAGCAGGAAGGGGCGGACCTTGAGCCTCTGGTGTAAATGTGGGAGGGTGTTTTTGAAACTTTCCTCCCACAGTGTGTGTGACTGCTTCAGAATCAGGAGCAGGAAGTCGAGGCTTCTGTTGAACTTACTaagtttgcgtgtgtgtgtgtgtgtgtgtgtatgagaatgttgaaatatagaaaacaaaaaaatataaatattattataacactACATCCAAGGAACCCGTGTTCAAACTGGAGTCAAAAGGTTCTCATTTTTTGTCAGTGCTCACCATTATTtcgagagagaggggaaaaagatGTTCTGACGAGAACATATGAATAGGAGAGGGTAAGGGGGGAATGTGAGTTGGAGATAAAGAGATGGAGAATGTATGTCATATATAAAAAGGAAGGATTTGTTAAGCTGATCGGGAACTAGCTGTAGATGCGAAGGACCCTTAGGTGTGATGTGACTGTTCATATTTAGAAAATTCATATACTATTTACTGAGGGAATTTAATATGAATAGGTGAACCTGAATTTTACATTCTAAGTGCAATATTGCAGTATCTTGAAGGCCTAGATTTTGTGTTATATGTTTGTGTCAGAATTCACAACACTCCATAGCATTCAGAATTTTCTTGGCAATAGTTTAATGAAAGTATTcttttaaaatagctttttctAACTCTATTTGCTGCCAGCTATCgcatatttatttagctattttgctAACAGGCCGGTGCCCATCGTGTAATTTGCCACTAAGACCAACATGAAGGGTGCACCTTTTAAGCAATGCAATCATGAGAGCTTTAAGTGTCTGTGTATGTCCTCTTTTCATTGTGCACAAACCTACATACCATTCTTAATGTAGTTTGGAGCACTGATCAGACTGATCTGACAGTCTAAATGCACACTGGGCCTCGTGTTACTAATCCAGATGACTGTTGAATCGATTGCCTAatcaatgatgatgatgatgatgtcttTTGGGTGTGAGTGCCTTTGATTTTTGCAATGCTGGAATGAGCGTGGGAAATCTGTCCTCAGAGATAAAAGACTCAGGACTGCAATGCGATCCTTCACATCTTCTCCCTCCCTGCTTCATCGAGTTTTTAGCATTGGACACCATCACAATAATGTAATAACAGTAAGCGGGCGATGGACCACACGCTGCGACCAAGTCACACACCCATGTTTGATGGAGTACTGTTGAAGTTTCTGCTGAAGGATACAGAGTGAATTAGGATTCTACAGTGTCGGCGTAAAGGAcaacccctctctctttcatattTTTGACAAAGagttggaaaaaaaagttaCCTGATTGTCCTCGTGTTCTGGTGTTACTGTgacatttctttaaataaaagatCTGAGCAGTGTG

Function

GO: NA

KEGG:

id description
K10268 FBXL2_20; F-box and leucine-rich repeat protein 2/20

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU272200 lncRNA upstream 2608 28770134 ~ 28782034 (+) True G200511
TU272159 lncRNA upstream 39318 28703778 ~ 28745324 (+) False G200482
TU272169 lncRNA upstream 46316 28736851 ~ 28738326 (+) True G200490
TU272165 lncRNA upstream 55686 28726065 ~ 28728956 (+) True G200488
TU272154 lncRNA upstream 71297 28703778 ~ 28713345 (+) True G200482
TU272429 lncRNA downstream 215855 29018573 ~ 29019097 (+) True G200628
TU272650 lncRNA downstream 659443 29462161 ~ 29467157 (+) True G200780
TU272652 lncRNA downstream 659443 29462161 ~ 29467527 (+) False G200780
TU272661 lncRNA downstream 682222 29484940 ~ 29485686 (+) True G200785
TU272676 lncRNA downstream 725345 29528063 ~ 29568073 (+) False lypla2
XM_007245661.3 mRNA upstream 29183 28747087 ~ 28755459 (+) True crtap
XM_007245656.3 mRNA upstream 84862 28681071 ~ 28699780 (+) True LOC103028750
XM_007245654.3 mRNA upstream 112195 28657320 ~ 28672447 (+) True LOC103028128
XM_007245651.3 mRNA upstream 192455 28584404 ~ 28592187 (+) True anp32e
XM_007245648.3 mRNA upstream 271055 28508137 ~ 28513587 (+) True jtb
XM_022683252.1 mRNA downstream 5611 28808329 ~ 28874267 (+) True clasp2
XM_022683253.1 mRNA downstream 5611 28808329 ~ 28874267 (+) False clasp2
XM_022683263.1 mRNA downstream 5611 28808329 ~ 28874267 (+) False clasp2
XM_022683264.1 mRNA downstream 5611 28808329 ~ 28874267 (+) False clasp2
XM_022683255.1 mRNA downstream 5611 28808329 ~ 28874267 (+) False clasp2
TU271959 other upstream 588444 28193574 ~ 28196198 (+) True G200341
TU271914 other upstream 801292 27981513 ~ 27983350 (+) False LOC103032101
TU271825 other upstream 965992 27815336 ~ 27818650 (+) True G200235
trnai-uau_9 other upstream 1293612 27490937 ~ 27491030 (+) True trnai-uau_9
trnai-uau_8 other upstream 1294506 27490043 ~ 27490136 (+) True trnai-uau_8
TU272690 other downstream 748418 29551136 ~ 29552883 (+) False eloa
TU273012 other downstream 2207208 31009926 ~ 31012165 (+) False rbm24
TU273004 other downstream 2209993 31012711 ~ 31015045 (+) True G201018
trnaq-uug_6 other downstream 2627829 31430547 ~ 31430618 (+) True trnaq-uug_6
trnar-acg_20 other downstream 2628233 31430951 ~ 31431023 (+) True trnar-acg_20

Expression Profile