RNA id: trnai-uau_8


Basic Information

Item Value
RNA id trnai-uau_8
length 74
RNA type tRNA
GC content 0.58
exon number 2
gene id trnai-uau_8
representative True

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 27490043 ~ 27490136 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GCTCCAGTGGCGCAATCGGTTAGCGCGCGGTACTTATAATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU271719 lncRNA upstream 21241 27467360 ~ 27468802 (+) True G200148
TU271708 lncRNA upstream 44594 27444894 ~ 27445449 (+) True G200143
TU271683 lncRNA upstream 133102 27356720 ~ 27356941 (+) True G200125
TU271680 lncRNA upstream 154821 27332014 ~ 27335222 (+) True G200124
TU271664 lncRNA upstream 184457 27304558 ~ 27305586 (+) False LOC103023645
TU271737 lncRNA downstream 21852 27511988 ~ 27515678 (+) True G200158
TU271738 lncRNA downstream 21852 27511988 ~ 27515678 (+) False G200158
TU271747 lncRNA downstream 116337 27606473 ~ 27609051 (+) True G200166
TU271804 lncRNA downstream 240734 27730870 ~ 27740109 (+) False dync1i1
TU271880 lncRNA downstream 429319 27919455 ~ 27919995 (+) True G200278
XM_007259808.3 mRNA upstream 23539 27451009 ~ 27466504 (+) True casd1
XM_022683235.1 mRNA upstream 46993 27417573 ~ 27443050 (+) True col1a2
XM_022683236.1 mRNA upstream 46993 27417573 ~ 27443050 (+) False col1a2
XM_007259806.2 mRNA upstream 158454 27307466 ~ 27331589 (+) True LOC103023978
XM_007259805.3 mRNA upstream 184490 27304521 ~ 27305553 (+) True LOC103023645
XM_007259814.3 mRNA downstream 5139 27495275 ~ 27588721 (+) False ppp1r9a
XM_007259815.3 mRNA downstream 5139 27495275 ~ 27588721 (+) False ppp1r9a
XM_007259816.3 mRNA downstream 5139 27495275 ~ 27588721 (+) False ppp1r9a
XM_022683238.1 mRNA downstream 5139 27495275 ~ 27588721 (+) False ppp1r9a
XM_007259817.3 mRNA downstream 105722 27595858 ~ 27602040 (+) True asb4
TU271651 other upstream 205476 27284220 ~ 27284567 (+) True G200104
TU271396 other upstream 876861 26610429 ~ 26613182 (+) False c23h18orf21
TU271111 other upstream 1869914 25617928 ~ 25620129 (+) True ndufs5
TU271109 other upstream 1869914 25618034 ~ 25620129 (+) False ndufs5
TU271110 other upstream 1869914 25618034 ~ 25620129 (+) False ndufs5
trnai-uau_9 other downstream 801 27490937 ~ 27491030 (+) True trnai-uau_9
TU271825 other downstream 325200 27815336 ~ 27818650 (+) True G200235
TU271914 other downstream 491377 27981513 ~ 27983350 (+) False LOC103032101
TU271959 other downstream 703438 28193574 ~ 28196198 (+) True G200341
TU272690 other downstream 2061000 29551136 ~ 29552883 (+) False eloa