RNA id: trnai-uau_9


Basic Information

Item Value
RNA id trnai-uau_9
length 74
RNA type tRNA
GC content 0.57
exon number 2
gene id trnai-uau_9
representative True

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 27490937 ~ 27491030 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GCTCTAGTGGCGCAATCGGTTAGCGCGCGGTACTTATAATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU271719 lncRNA upstream 22135 27467360 ~ 27468802 (+) True G200148
TU271708 lncRNA upstream 45488 27444894 ~ 27445449 (+) True G200143
TU271683 lncRNA upstream 133996 27356720 ~ 27356941 (+) True G200125
TU271680 lncRNA upstream 155715 27332014 ~ 27335222 (+) True G200124
TU271664 lncRNA upstream 185351 27304558 ~ 27305586 (+) False LOC103023645
TU271737 lncRNA downstream 20958 27511988 ~ 27515678 (+) True G200158
TU271738 lncRNA downstream 20958 27511988 ~ 27515678 (+) False G200158
TU271747 lncRNA downstream 115443 27606473 ~ 27609051 (+) True G200166
TU271804 lncRNA downstream 239840 27730870 ~ 27740109 (+) False dync1i1
TU271880 lncRNA downstream 428425 27919455 ~ 27919995 (+) True G200278
XM_007259808.3 mRNA upstream 24433 27451009 ~ 27466504 (+) True casd1
XM_022683235.1 mRNA upstream 47887 27417573 ~ 27443050 (+) True col1a2
XM_022683236.1 mRNA upstream 47887 27417573 ~ 27443050 (+) False col1a2
XM_007259806.2 mRNA upstream 159348 27307466 ~ 27331589 (+) True LOC103023978
XM_007259805.3 mRNA upstream 185384 27304521 ~ 27305553 (+) True LOC103023645
XM_007259814.3 mRNA downstream 4245 27495275 ~ 27588721 (+) False ppp1r9a
XM_007259815.3 mRNA downstream 4245 27495275 ~ 27588721 (+) False ppp1r9a
XM_007259816.3 mRNA downstream 4245 27495275 ~ 27588721 (+) False ppp1r9a
XM_022683238.1 mRNA downstream 4245 27495275 ~ 27588721 (+) False ppp1r9a
XM_007259817.3 mRNA downstream 104828 27595858 ~ 27602040 (+) True asb4
trnai-uau_8 other upstream 801 27490043 ~ 27490136 (+) True trnai-uau_8
TU271651 other upstream 206370 27284220 ~ 27284567 (+) True G200104
TU271396 other upstream 877755 26610429 ~ 26613182 (+) False c23h18orf21
TU271111 other upstream 1870808 25617928 ~ 25620129 (+) True ndufs5
TU271825 other downstream 324306 27815336 ~ 27818650 (+) True G200235
TU271914 other downstream 490483 27981513 ~ 27983350 (+) False LOC103032101
TU271959 other downstream 702544 28193574 ~ 28196198 (+) True G200341
TU272690 other downstream 2060106 29551136 ~ 29552883 (+) False eloa
TU273012 other downstream 3518896 31009926 ~ 31012165 (+) False rbm24