RNA id: trnaq-uug_6


Basic Information

Item Value
RNA id trnaq-uug_6
length 72
RNA type tRNA
GC content 0.53
exon number 1
gene id trnaq-uug_6
representative True

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 31430547 ~ 31430618 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGTCCCATGGTGTAATGGTAAGCACTCTGGACTTTGAATCCAGCGATCCGAGTTCGAATCTCGGTGGGACCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU273150 lncRNA upstream 167587 31259945 ~ 31262960 (+) True G201135
TU273011 lncRNA upstream 345943 31009926 ~ 31084604 (+) False rbm24
TU273008 lncRNA upstream 400658 31018604 ~ 31029889 (+) True G201019
TU273026 lncRNA upstream 424622 31005632 ~ 31005925 (+) True G201030
TU272988 lncRNA upstream 620321 30809995 ~ 30810226 (+) True G201010
TU273187 lncRNA downstream 10827 31441445 ~ 31445123 (+) False G201163
TU273188 lncRNA downstream 10827 31441445 ~ 31451756 (+) True G201163
TU273192 lncRNA downstream 117731 31548349 ~ 31631753 (+) True G201167
TU273237 lncRNA downstream 508883 31939501 ~ 31939940 (+) True G201206
TU273260 lncRNA downstream 582460 32013078 ~ 32065707 (+) True G201225
XM_007245753.3 mRNA upstream 172825 31224444 ~ 31257722 (+) False med30
XM_007245754.2 mRNA upstream 172825 31224454 ~ 31257722 (+) False med30
XM_007245755.3 mRNA upstream 187223 31224444 ~ 31243324 (+) True med30
XM_007245752.3 mRNA upstream 211629 31191756 ~ 31218918 (+) True LOC103030437
XM_007245745.2 mRNA upstream 243446 31164226 ~ 31187101 (+) True grina
XM_007247888.2 mRNA downstream 623097 32053715 ~ 32067640 (+) True tpmt
XM_007247882.3 mRNA downstream 641027 32071645 ~ 32180536 (+) True LOC103047171
XM_007247885.3 mRNA downstream 756539 32187157 ~ 32193783 (+) True ncdn
XM_007247887.3 mRNA downstream 756635 32187253 ~ 32193783 (+) False ncdn
XM_007247880.3 mRNA downstream 765597 32196215 ~ 32211930 (+) False tfap2e
TU273004 other upstream 415502 31012711 ~ 31015045 (+) True G201018
TU273012 other upstream 418382 31009926 ~ 31012165 (+) False rbm24
TU272690 other upstream 1877664 29551136 ~ 29552883 (+) False eloa
TU271959 other upstream 3234349 28193574 ~ 28196198 (+) True G200341
TU271914 other upstream 3447197 27981513 ~ 27983350 (+) False LOC103032101
trnar-acg_20 other downstream 333 31430951 ~ 31431023 (+) True trnar-acg_20
trnaq-cug_18 other downstream 623 31431241 ~ 31431312 (+) True trnaq-cug_18
trnaq-cug_19 other downstream 953 31431571 ~ 31431642 (+) True trnaq-cug_19
trnaq-cug_20 other downstream 1286 31431904 ~ 31431975 (+) True trnaq-cug_20
TU273238 other downstream 511584 31942202 ~ 31987057 (+) True G201207