Item | Value |
---|---|
RNA id | TU411942 |
length | 868 |
lncRNA type | inter_gene |
GC content | 0.37 |
exon number | 3 |
gene id | G299477 |
representative | False |
Item | Value |
---|---|
chromosome id | NW_019172830.1 |
NCBI id | APWO02000048.1 |
chromosome length | 5891159 |
location | 2187333 ~ 2204255 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU411930 | lncRNA | upstream | 334198 | 1854585 ~ 1854786 (+) | True | G299475 |
TU411927 | lncRNA | upstream | 342489 | 1846239 ~ 1846495 (+) | True | G299472 |
TU411912 | lncRNA | upstream | 356083 | 1832038 ~ 1832901 (+) | True | G299458 |
TU411892 | lncRNA | upstream | 465703 | 1722234 ~ 1723281 (+) | True | G299438 |
TU411891 | lncRNA | upstream | 466885 | 1720922 ~ 1722099 (+) | True | G299437 |
TU412018 | lncRNA | downstream | 103991 | 2300536 ~ 2306135 (+) | True | G299494 |
TU412021 | lncRNA | downstream | 118848 | 2315393 ~ 2315902 (+) | True | G299496 |
TU412027 | lncRNA | downstream | 137069 | 2333614 ~ 2342102 (+) | True | G299501 |
TU412039 | lncRNA | downstream | 146372 | 2342917 ~ 2343342 (+) | True | G299510 |
TU412052 | lncRNA | downstream | 237993 | 2434538 ~ 2436421 (+) | True | G299521 |
XM_007231730.3 | mRNA | upstream | 608048 | 1579110 ~ 1580936 (+) | True | LOC103044644 |
XM_022665255.1 | mRNA | upstream | 621906 | 1562838 ~ 1567078 (+) | True | LOC103047296 |
XM_022665256.1 | mRNA | upstream | 626955 | 1558494 ~ 1562029 (+) | True | LOC111188231 |
XM_022665239.1 | mRNA | upstream | 686004 | 1492578 ~ 1502980 (+) | True | traf6 |
XM_022665217.1 | mRNA | upstream | 759745 | 1419036 ~ 1429239 (+) | False | LOC103021976 |
XM_022665286.1 | mRNA | downstream | 202172 | 2398717 ~ 2927862 (+) | True | LOC103025330 |
XM_007246944.3 | mRNA | downstream | 1461314 | 3657859 ~ 3745126 (+) | True | tshz3 |
XM_022665249.1 | mRNA | downstream | 2665651 | 4862196 ~ 4894687 (+) | True | LOC103030650 |
XM_022665204.1 | mRNA | downstream | 2706089 | 4902634 ~ 5024425 (+) | False | madd |
XM_022665179.1 | mRNA | downstream | 2706090 | 4902635 ~ 5024834 (+) | False | madd |
TU411691 | other | upstream | 622290 | 1562888 ~ 1566694 (+) | False | LOC103047296 |
TU411618 | other | upstream | 864130 | 1324420 ~ 1324854 (+) | True | G299236 |
TU411607 | other | upstream | 970878 | 1217809 ~ 1218106 (+) | True | G299226 |
TU411377 | other | upstream | 1482160 | 705160 ~ 706824 (+) | True | G299046 |
TU411298 | other | upstream | 1718364 | 462414 ~ 470620 (+) | True | G299000 |
TU412046 | other | downstream | 413834 | 2610379 ~ 2636008 (+) | False | LOC103025330 |
TU412522 | other | downstream | 2972081 | 5168626 ~ 5170108 (+) | False | G299903 |
TU412525 | other | downstream | 2972081 | 5168626 ~ 5170108 (+) | True | G299903 |