Item | Value |
---|---|
RNA id | TU412236 |
length | 450 |
lncRNA type | inter_gene |
GC content | 0.41 |
exon number | 1 |
gene id | G299685 |
representative | True |
Item | Value |
---|---|
chromosome id | NW_019172830.1 |
NCBI id | APWO02000048.1 |
chromosome length | 5891159 |
location | 3395631 ~ 3396080 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU412230 | lncRNA | upstream | 35078 | 3360289 ~ 3360553 (+) | True | G299679 |
TU412221 | lncRNA | upstream | 166621 | 3228619 ~ 3229010 (+) | True | G299670 |
TU412220 | lncRNA | upstream | 195440 | 3199945 ~ 3200191 (+) | True | G299669 |
TU412180 | lncRNA | upstream | 332509 | 3062821 ~ 3063122 (+) | True | G299641 |
TU412178 | lncRNA | upstream | 364645 | 3029564 ~ 3030986 (+) | True | G299640 |
TU412245 | lncRNA | downstream | 144255 | 3540335 ~ 3541034 (+) | True | G299694 |
TU412251 | lncRNA | downstream | 161351 | 3557431 ~ 3557840 (+) | True | G299700 |
TU412266 | lncRNA | downstream | 301024 | 3697104 ~ 3705830 (+) | True | G299712 |
TU412312 | lncRNA | downstream | 393184 | 3789264 ~ 3789471 (+) | True | G299744 |
TU412317 | lncRNA | downstream | 462502 | 3858582 ~ 3858996 (+) | True | G299749 |
XM_022665286.1 | mRNA | upstream | 467769 | 2398717 ~ 2927862 (+) | True | LOC103025330 |
XM_007231730.3 | mRNA | upstream | 1814695 | 1579110 ~ 1580936 (+) | True | LOC103044644 |
XM_022665255.1 | mRNA | upstream | 1828553 | 1562838 ~ 1567078 (+) | True | LOC103047296 |
XM_022665256.1 | mRNA | upstream | 1833602 | 1558494 ~ 1562029 (+) | True | LOC111188231 |
XM_022665239.1 | mRNA | upstream | 1892651 | 1492578 ~ 1502980 (+) | True | traf6 |
XM_007246944.3 | mRNA | downstream | 261779 | 3657859 ~ 3745126 (+) | True | tshz3 |
XM_022665249.1 | mRNA | downstream | 1466116 | 4862196 ~ 4894687 (+) | True | LOC103030650 |
XM_022665204.1 | mRNA | downstream | 1506554 | 4902634 ~ 5024425 (+) | False | madd |
XM_022665179.1 | mRNA | downstream | 1506555 | 4902635 ~ 5024834 (+) | False | madd |
XM_022665180.1 | mRNA | downstream | 1506555 | 4902635 ~ 5024425 (+) | False | madd |
TU412046 | other | upstream | 759623 | 2610379 ~ 2636008 (+) | False | LOC103025330 |
TU411938 | other | upstream | 1191376 | 2196179 ~ 2204255 (+) | False | G299477 |
TU411947 | other | upstream | 1191376 | 2196179 ~ 2204255 (+) | False | G299477 |
TU411691 | other | upstream | 1828937 | 1562888 ~ 1566694 (+) | False | LOC103047296 |
TU411618 | other | upstream | 2070777 | 1324420 ~ 1324854 (+) | True | G299236 |
TU412522 | other | downstream | 1772546 | 5168626 ~ 5170108 (+) | False | G299903 |
TU412525 | other | downstream | 1772546 | 5168626 ~ 5170108 (+) | True | G299903 |