Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022665265.1 |
| length | 1193 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 6 |
| gene id | LOC103040103 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NW_019172830.1 |
| NCBI id | APWO02000048.1 |
| chromosome length | 5891159 |
| location | 689257 ~ 701417 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K02833 | HRAS; GTPase HRas |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU411332 | lncRNA | upstream | 38050 | 633841 ~ 651207 (+) | True | G299028 |
| TU411309 | lncRNA | upstream | 189642 | 499215 ~ 499615 (+) | True | G299006 |
| TU411305 | lncRNA | upstream | 216154 | 470862 ~ 473103 (+) | True | G299003 |
| TU411294 | lncRNA | upstream | 249140 | 439913 ~ 440117 (+) | True | G298997 |
| TU411166 | lncRNA | upstream | 358141 | 296203 ~ 331116 (+) | True | G298903 |
| TU411394 | lncRNA | downstream | 34947 | 736364 ~ 737381 (+) | True | G299057 |
| TU411395 | lncRNA | downstream | 34947 | 736364 ~ 737381 (+) | False | G299057 |
| TU411412 | lncRNA | downstream | 68703 | 770120 ~ 771703 (+) | True | G299071 |
| TU411413 | lncRNA | downstream | 68882 | 770299 ~ 770603 (+) | True | G299072 |
| TU411420 | lncRNA | downstream | 92956 | 794373 ~ 795114 (+) | True | G299079 |
| XM_022665247.1 | mRNA | upstream | 190255 | 483770 ~ 499002 (+) | True | LOC111191160 |
| XM_022665230.1 | mRNA | upstream | 428236 | 232806 ~ 261021 (+) | True | LOC103024613 |
| XM_022665291.1 | mRNA | upstream | 498769 | 167671 ~ 190488 (+) | True | ttc17 |
| XM_022665231.1 | mRNA | upstream | 523160 | 154965 ~ 166097 (+) | True | prc1 |
| XM_022665293.1 | mRNA | upstream | 535509 | 138255 ~ 153748 (+) | True | vps33b |
| XM_022665233.1 | mRNA | downstream | 163816 | 865233 ~ 950940 (+) | True | LOC103023516 |
| XM_022665234.1 | mRNA | downstream | 525175 | 1226592 ~ 1229189 (+) | True | LOC111191156 |
| XM_022665235.1 | mRNA | downstream | 636354 | 1337771 ~ 1340796 (+) | True | LOC111191157 |
| XM_022665236.1 | mRNA | downstream | 682923 | 1384340 ~ 1413595 (+) | True | LOC103044962 |
| XM_022665216.1 | mRNA | downstream | 717619 | 1419036 ~ 1429239 (+) | True | LOC103021976 |
| TU411298 | other | upstream | 218637 | 462414 ~ 470620 (+) | True | G299000 |
| TU411137 | other | upstream | 531853 | 154984 ~ 157404 (+) | False | prc1 |
| TU411109 | other | upstream | 610577 | 78480 ~ 78680 (+) | True | G298859 |
| TU411098 | other | upstream | 622070 | 52791 ~ 67187 (+) | False | LOC111191161 |
| TU411377 | other | downstream | 3743 | 705160 ~ 706824 (+) | True | G299046 |
| TU411607 | other | downstream | 516392 | 1217809 ~ 1218106 (+) | True | G299226 |
| TU411618 | other | downstream | 623003 | 1324420 ~ 1324854 (+) | True | G299236 |
| TU411691 | other | downstream | 861471 | 1562888 ~ 1566694 (+) | False | LOC103047296 |
| TU411938 | other | downstream | 1494762 | 2196179 ~ 2204255 (+) | False | G299477 |
