Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU4240 |
| length | 864 |
| lncRNA type | intronic |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G3232 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 12714618 ~ 12720840 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU4203 | lncRNA | upstream | 56311 | 12577080 ~ 12658307 (+) | True | G3205 |
| TU4166 | lncRNA | upstream | 462006 | 12246977 ~ 12252612 (+) | True | G3179 |
| TU4082 | lncRNA | upstream | 605582 | 12106391 ~ 12109036 (+) | True | G3129 |
| XR_002652018.1 | lncRNA | upstream | 756153 | 11958075 ~ 11958465 (+) | True | LOC111196183 |
| TU4042 | lncRNA | upstream | 787368 | 11924450 ~ 11927250 (+) | False | G3096 |
| XR_002652336.1 | lncRNA | downstream | 268745 | 12989585 ~ 12992123 (+) | True | LOC111197033 |
| XR_002652330.1 | lncRNA | downstream | 269979 | 12990819 ~ 12992123 (+) | False | LOC111197033 |
| TU4352 | lncRNA | downstream | 278205 | 12999045 ~ 12999446 (+) | True | G3323 |
| TU4378 | lncRNA | downstream | 354757 | 13075597 ~ 13162587 (+) | True | G3342 |
| TU4377 | lncRNA | downstream | 432180 | 13153020 ~ 13205546 (+) | False | G3342 |
| XM_007234504.2 | mRNA | upstream | 45849 | 12641165 ~ 12668769 (+) | True | mipep |
| XM_007234499.3 | mRNA | upstream | 76359 | 12623464 ~ 12638259 (+) | True | LOC103047626 |
| XM_007234491.3 | mRNA | upstream | 112082 | 12288119 ~ 12602536 (+) | True | LOC103046499 |
| XM_007234495.3 | mRNA | upstream | 112082 | 12288121 ~ 12602536 (+) | False | LOC103046499 |
| XM_007234492.3 | mRNA | upstream | 112082 | 12288121 ~ 12602536 (+) | False | LOC103046499 |
| XM_007234508.3 | mRNA | downstream | 68061 | 12788901 ~ 12793303 (+) | True | trappc4 |
| XM_007260901.3 | mRNA | downstream | 282697 | 13003537 ~ 13028805 (+) | True | LOC103023132 |
| XM_022686557.1 | mRNA | downstream | 293765 | 13014605 ~ 13028805 (+) | False | LOC103023132 |
| XM_022686605.1 | mRNA | downstream | 293822 | 13014662 ~ 13028805 (+) | False | LOC103023132 |
| XM_007260902.3 | mRNA | downstream | 313640 | 13034480 ~ 13042611 (+) | True | LOC103023447 |
| TU4041 | other | upstream | 787368 | 11924450 ~ 11927250 (+) | True | G3096 |
| TU3793 | other | upstream | 1425772 | 11288131 ~ 11288846 (+) | True | G2910 |
| TU3788 | other | upstream | 1435459 | 11273998 ~ 11279159 (+) | False | LOC103029949 |
| XR_001518524.2 | other | upstream | 2972153 | 9634094 ~ 9742465 (+) | False | LOC103039705 |
| TU3313 | other | upstream | 3044493 | 9631865 ~ 9670125 (+) | True | G2509 |
| TU4335 | other | downstream | 261785 | 12982625 ~ 12984269 (+) | True | G3313 |
| TU4998 | other | downstream | 2240333 | 14961173 ~ 14963583 (+) | True | G3736 |
| TU5080 | other | downstream | 2317715 | 15038555 ~ 15038914 (+) | True | G3790 |
| trnae-uuc_1 | other | downstream | 2325473 | 15046313 ~ 15046384 (+) | True | trnae-uuc_1 |
| XR_002649582.1 | other | downstream | 2352000 | 15072840 ~ 15162274 (+) | False | LOC103023550 |
