Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU5658 |
| length | 881 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 4 |
| gene id | LOC111192355 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 16356282 ~ 16366689 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002649857.1 | lncRNA | upstream | 6124 | 16349607 ~ 16350551 (+) | True | LOC111192356 |
| TU5647 | lncRNA | upstream | 41738 | 16314112 ~ 16314937 (+) | True | G4167 |
| TU5643 | lncRNA | upstream | 44006 | 16311941 ~ 16312669 (+) | True | G4164 |
| TU5634 | lncRNA | upstream | 46030 | 16293511 ~ 16310645 (+) | True | G4158 |
| TU5707 | lncRNA | downstream | 115318 | 16480335 ~ 16480652 (+) | True | G4214 |
| TU5801 | lncRNA | downstream | 314388 | 16679405 ~ 16681219 (+) | True | G4277 |
| TU5862 | lncRNA | downstream | 779904 | 17144921 ~ 17145205 (+) | True | G4331 |
| TU5865 | lncRNA | downstream | 789743 | 17154760 ~ 17155096 (+) | True | G4334 |
| TU5868 | lncRNA | downstream | 792627 | 17157644 ~ 17157851 (+) | True | G4337 |
| XM_007245984.3 | mRNA | upstream | 64555 | 16280969 ~ 16292120 (+) | True | LOC103022964 |
| XM_007245980.3 | mRNA | upstream | 79842 | 16271162 ~ 16276833 (+) | True | LOC103022345 |
| XM_007245988.3 | mRNA | upstream | 145170 | 16205897 ~ 16211505 (+) | True | dll3 |
| XM_007245989.2 | mRNA | upstream | 164107 | 16159758 ~ 16192568 (+) | True | timm50 |
| XM_007245975.3 | mRNA | downstream | 89667 | 16454684 ~ 16477105 (+) | True | LOC103047564 |
| XM_007245974.3 | mRNA | downstream | 117179 | 16482196 ~ 16530242 (+) | False | exoc3l2 |
| XM_007245973.3 | mRNA | downstream | 126042 | 16491059 ~ 16530242 (+) | True | exoc3l2 |
| XM_015604961.2 | mRNA | downstream | 166332 | 16531349 ~ 16536523 (+) | True | LOC103030966 |
| XM_022668852.1 | mRNA | downstream | 168073 | 16533090 ~ 16536523 (+) | False | LOC103030966 |
| XR_002649582.1 | other | upstream | 1194401 | 15072840 ~ 15162274 (+) | False | LOC103023550 |
| trnae-uuc_1 | other | upstream | 1310291 | 15046313 ~ 15046384 (+) | True | trnae-uuc_1 |
| TU5080 | other | upstream | 1317761 | 15038555 ~ 15038914 (+) | True | G3790 |
| TU4998 | other | upstream | 1393092 | 14961173 ~ 14963583 (+) | True | G3736 |
| TU4335 | other | upstream | 3372406 | 12982625 ~ 12984269 (+) | True | G3313 |
| TU5723 | other | downstream | 177925 | 16542942 ~ 16545854 (+) | True | G4221 |
| TU5717 | other | downstream | 254029 | 16619046 ~ 16623069 (+) | False | G4219 |
| TU5719 | other | downstream | 254029 | 16619046 ~ 16622740 (+) | True | G4219 |
| TU6119 | other | downstream | 1706947 | 18071964 ~ 18073663 (+) | True | G4550 |
| trnaw-cca | other | downstream | 2036037 | 18401054 ~ 18401125 (+) | True | trnaw-cca |
