Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU6389 |
| length | 251 |
| lncRNA type | inter_gene |
| GC content | 0.65 |
| exon number | 2 |
| gene id | G4761 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 19104769 ~ 19152047 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU6381 | lncRNA | upstream | 2720 | 19101608 ~ 19102049 (+) | True | G4753 |
| TU6379 | lncRNA | upstream | 60396 | 19041392 ~ 19044373 (+) | True | G4751 |
| TU6370 | lncRNA | upstream | 100253 | 19003275 ~ 19004516 (+) | True | G4746 |
| TU6366 | lncRNA | upstream | 113821 | 18990429 ~ 18990948 (+) | True | G4742 |
| TU6340 | lncRNA | upstream | 161371 | 18941227 ~ 18943398 (+) | True | G4717 |
| TU6449 | lncRNA | downstream | 126724 | 19278771 ~ 19279016 (+) | True | G4809 |
| TU6500 | lncRNA | downstream | 487329 | 19639376 ~ 19648833 (+) | True | G4853 |
| TU6548 | lncRNA | downstream | 581474 | 19733521 ~ 19735640 (+) | True | G4892 |
| TU6562 | lncRNA | downstream | 633307 | 19785354 ~ 19785628 (+) | True | G4902 |
| TU6589 | lncRNA | downstream | 1044796 | 20196843 ~ 20197053 (+) | True | G4919 |
| XM_007231017.3 | mRNA | upstream | 3451 | 19068463 ~ 19101318 (+) | True | LOC103030891 |
| XM_007231018.3 | mRNA | upstream | 3451 | 19068467 ~ 19101318 (+) | False | LOC103030891 |
| XM_022669322.1 | mRNA | upstream | 174949 | 18905646 ~ 18929820 (+) | True | LOC103038796 |
| XM_022669310.1 | mRNA | upstream | 233950 | 18666879 ~ 18870819 (+) | True | fat3 |
| XM_007233954.3 | mRNA | upstream | 605638 | 18487006 ~ 18499131 (+) | True | LOC103035466 |
| XM_022671405.1 | mRNA | downstream | 689172 | 19841219 ~ 19841977 (+) | True | LOC111192961 |
| XM_007247674.3 | mRNA | downstream | 1369167 | 20521214 ~ 20536207 (+) | True | psmd2 |
| XM_015605437.2 | mRNA | downstream | 1385673 | 20537720 ~ 20545404 (+) | True | LOC107197593 |
| XM_007247670.2 | mRNA | downstream | 1393493 | 20545540 ~ 20548431 (+) | True | LOC103036360 |
| XM_022669425.1 | mRNA | downstream | 1403412 | 20555459 ~ 20557658 (+) | True | LOC111192413 |
| TU6209 | other | upstream | 344911 | 18759375 ~ 18759858 (+) | True | G4612 |
| TU6210 | other | upstream | 344911 | 18759375 ~ 18759858 (+) | False | G4612 |
| TU6211 | other | upstream | 344911 | 18759375 ~ 18759858 (+) | False | G4612 |
| trnag-ucc | other | upstream | 700993 | 18403705 ~ 18403776 (+) | True | trnag-ucc |
| trnaw-cca | other | upstream | 703644 | 18401054 ~ 18401125 (+) | True | trnaw-cca |
| TU6404 | other | downstream | 8684 | 19160731 ~ 19165631 (+) | True | G4775 |
| TU6659 | other | downstream | 1397170 | 20549217 ~ 20551609 (+) | False | LOC107197594 |
| TU6745 | other | downstream | 1831660 | 20983707 ~ 20999200 (+) | True | G5026 |
| trnag-ucc_4 | other | downstream | 3437413 | 22589460 ~ 22589531 (+) | True | trnag-ucc_4 |
| trnag-ucc_5 | other | downstream | 3438454 | 22590501 ~ 22590572 (+) | True | trnag-ucc_5 |
