RNA id: TU9216


Basic Information

Item Value
RNA id TU9216
length 475
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G6765
representative True

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 26913401 ~ 26916530 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

aaaaaaaattacaataagacaaataatttctacctataatgtgacctataacctgtacaatgcaattgaaaaacaaacagaaatctttcagggaggtgaagtaaaaataaacaactgagatATTGAGGTTGCATAAGTGTGCACACCCTTTTATAACTAggggtgttgctgtgttcaAATTTAACCAATAACCTTCAAACTCACTTTAAATTGGAGTCAGCACACACCTGTCAACAATTAAAGTGCCTCTGATCAACTCCAAATAAAGTTTAACTGTTCTAGTAGGCTTGTCCTGATATTTTTGTAGCcacatctttcagcacaagccATGGTCCACAAAGAGATGCCAGAGCATCAGAGGTATCTCATTATTCATAGATATCAGTCAAGTGAAGGCTacaaaagtcattaaatataccatggaacactttgaagactgtcatcatcaagtggagaaaacatggcacaacaagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU9210 lncRNA upstream 21835 26889213 ~ 26891566 (+) True G6759
TU9142 lncRNA upstream 304659 26597659 ~ 26608742 (+) True G6711
TU9146 lncRNA upstream 313159 26583279 ~ 26600242 (+) False G6711
XR_002650106.1 lncRNA upstream 420665 26487773 ~ 26492736 (+) True LOC111192717
TU9069 lncRNA upstream 507471 26402779 ~ 26405930 (+) True G6666
XM_007245956.3 mRNA upstream 15100 26894658 ~ 26898301 (+) True rad1
XM_007245954.3 mRNA upstream 24863 26886050 ~ 26888538 (+) True tmem97
XM_007245950.3 mRNA upstream 29404 26867235 ~ 26883997 (+) True LOC103040422
XM_022671028.1 mRNA upstream 30671 26867235 ~ 26882730 (+) False LOC103040422
XM_007245952.3 mRNA upstream 46242 26789609 ~ 26867159 (+) False usp32
XM_015604965.2 mRNA downstream 2761 26919291 ~ 26931495 (+) True LOC103042574
TU8949 other upstream 867155 26040156 ~ 26046246 (+) True G6576
TU8950 other upstream 867155 26040156 ~ 26046246 (+) False G6576
TU8951 other upstream 867155 26043059 ~ 26046246 (+) False G6576
XR_002650083.1 other upstream 1485050 25412194 ~ 25428351 (+) False LOC103027586
TU7890 other upstream 3005927 23878152 ~ 23907474 (+) True LOC103022942
XR_002650136.1 other downstream 2761 26919291 ~ 26931495 (+) False LOC103042574

Expression Profile