RNA id: XM_022670741.1


Basic Information

Item Value
RNA id XM_022670741.1
length 4547
RNA type mRNA
GC content 0.49
exon number 6
gene id mnt
representative True

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 25681076 ~ 25713432 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TCGTGCTTGAGTCCGGTTTCTGTAGGGATTGACTGCGCCGCCGAGCCGGAGCGGGTCCGGGTTTTGAGCTCCTCCTGGCGTGGAGGAGTCAGTGGAGGGGCGGTCGGCGGTGCGACGTGCAGCCTGCTGGAGCTCCAGCCCGCCATCTTGTCGCGACTCCTCTACGTGCGTGGAAGAGTTTCTGCGAGGGGGATCCGGTTACAGCCGCCGctgcctttttctttctttctgtttttttccttctaCAGGCGAAGGTGTTGGGTCTCGGGCGGAAGACTGGTCTTTCTGACTGACCCGAAGCGAAGGCTGTTCGGCAGTTTCTCGTGGAGCTGGGTGGGAAAAGAGCGGACTGAAGCAGAGATGAGTATCGAAACGCTTTTAGAGGCAGCCAAGTTTCTGGAATTGCAAGCCCAGCAACAACAGAGAGCACGTGAGAACGAGCTACGAGAGAGACTGCGCCTCGAACGGGAGGCCGAGAAGCGGAGAGCAGAGGTTGTCTCCTGCGTTCAGCCTACACGTACCAATCACACAATCTGGGCTGAGGAGTCGACTCAAGAGCGTCATCACACCCCTGCACCTGCCCCacctcctccccctccccctcaagCTCTTCCTGCTCCCTCTATTCCCATCACGGTCATCCCCATCCCCTATGTTTCGTCGAGCCCCACCTCTTTACCTGCAACTCCTTCCACTCCACTCAGCCCCCCAACTACCCCCCGCCTCACACCTCCACGAAAAGCAACCCACTCCCCCCCAGCCCAGAGTGCACTGCACCAGTGCGCAGTCGTACCCCCTCAGGTGAAGGCCGCGCCAACACCTCTGGCCCAGACCAATGGCACTAAACCACCTCAGCTGCTGCAGCCCTACCCTGGGTCCATTGTCACAACCTCCCTGCTGCCTCAGCCAGCACAGTCCAGCCCTGTGTCCAGAGGCAGCCCTCCAGACGACCTGCGCAATCTGGACAACAAGAAAAGACCTGGCGGGGCGGGCACACGGGAGGTACACAACAAGCTTGAAAAAAACAGaCGTGCACACTTAAAGGAGTGCTTTGAGACTCTTAAGAAGAACATCCCTAATGTGGATGAAAAGAAGACCTCCAATCTGAGTGTGTTGAGAAGTGCACTAAGATACATACAGACTCTGAAGAGGAAAGAGAAGGAGTATGAACACGAGATGGAGCGTTTGGCTCGAGAGAAGATCTCCACTCAGCAGAGGTTGGCCGAACTGAAGAATGACCTCAGCCAGTGGATGGACGTGATGGAGGTCGACAGAGTGCTGCGCCAGACTGTCCAGCCTGAAGATGATCAGGTGTCCACCTCCACAGCCTCAGAAGGTGAAGATAACATTGATGAGGACATGGAGGAGGAGAGCCCCTCAGCAGCGCCTGTCTCCTTACCTAAAGTGCCTCTCATCCTGCAGCCGGAGCTAAGGAAGCCCCAGCTGGCCCAGTCTCTGACCCAGCACCTGTCCATCCCTCCCAAATCCTCCGAACTGCATCCGCCTGCCCCTGCTCTTCAGCCTGCCCCTGCCTCAGCCCCTGTGCAGCCCTCTGCCCCTTCTCTCTCCCCCACTCCAGCCCAGGCTCCTAATGGCCTGGCCGCTTTGGCAccccagcagctccagacccAAGTGGTGACGGCTCATGGCCTTCCGCCTGCTCACACGCACATCGTGAGCGCTCCCAGCCTTCAACCTACCGTCATCACCCACGCTGCTGCAGCCTCTCACGCGTCCGTCATTCAAGCCGTCAACCACGTCATTCAGGCCGGCCCCAAGCAGCTGGCCCACGGACCTCAGCCTATTGGACACATCACGGTGCACCCGGTGGCCCACCTGGGCCAGCACCTGCCTGCACTCTACCCCCAACCGGTCACTGTTGCCCCGCCCACTGTGGTTAGCCACATCGCTCACACGCTCTCCCACAGCCAGGTGAACGGAACCTCCCAGCCTAGCCCACAGGCCGCAGCTATGGTGGCTAAACAGGTGCCCCAGGTGGTGGCTCATCACCCGCATCTGGCTGCCCAGACCGTCCTCAACCCGGTCACAATGGTGACCATGCCCTCCTTCCCCGTCAGTACGCTGAAGCTGGCCTGAAGCAGCGATCTGACGCGGACAACCTCGCGATTAACTAGGGCATGGATGGACTTGTGGACCCCAACAGTCACATACAGCATTACAGCAAGCAGATGAACATTCAATACATTCCAGAAAAAAAGATCATATAAAAAGACTCTGAAATCAAAATTGatttataactatataataatatacagtaaaatacaaaaaaagattttgtaTCCTTGTGTGTGGATCAAATCAGAGTGTGAAGATGTCTAGAGTCTTTCCGTGCTGCTCAGTATGTAtgatgcaagtgtgtgtgtgtgcttgaaaGAGCCTGTGTGAGTGCATGTGGAGTGTATCATTGGGATCAGTGTGCTAACCAGTCACAGAAGGATGTCAGCAAAAGCTGCTGTGTCATGTGACTGAAGGCATGGGTGGTGCAATGATTAGTGCTCTGTGGCTTAGTGTAGAAACCCATACCTCACTACTACTCTCATCAGCTAATGGATCACGACTCTTGCTGACCCTGTTCTGAGGGTTTAGGTGGTTGTGGTGGTCGTCCCTTCCCCCAGGTTTCCTCAACCCTTGTTGTTCTAGTTCTAGTAGTGCTGGAACAAAGGTGGAATTAGGTGAGATGCCCATACGCCTTTCTTTAATGTGATCAGTTAAAGTCCATGGTTAATTATTTACCTGCTCTGATGTTCCCACGTCTGAAAGAATAACTTCAACAAGGCTTTTCTGGGGCTGTaggtacactatatggacaaaagcatTGAGCTTTCTGctctagaatgttttttttttttttttttcccagaaagCAAATATAGATTCTATTCTATTAGTCCTCctttctattggcaatactatCTACTATTATCTACAGGCACTAGACAAGCGAGtgcaaattaaagtaaattaaattaaagctgaaTGTATTCATCAAAAGGGGTGTCCACAGTTTCCCAGactgggattaagcctagtcttgaacTACACAGTATTCAGAAATGAGATTTTGcattgaaaggaaaatgtaCTGTACAACTAAGCCTtagcttaatccctgtctgagaaactgaCCCGTAGTGTACATGTCCCAGTTAGAGTTACTGCTTGGTCTGGCTCTTAGGAGGctgctctgatttttttttttttacctttccgATTGTAGTAATAGATGACCTTTTTGGACGGAGGGACTCTTGAGTGAAATCAGTTTGCCTGTGCCTTTACCAGTGCCTTTTATAGGCACAGCAGTCCTGTTCAATGCTGCACAGACGCCCTCCACTGTCCATGATACGCATCTGCACTCTTATAGACTAGCACAGCTTCTGCAACAAACACAAAATCtcacagttattacagacattaaaatataaattgggGTGGGGGGTTAAAGAATAGGCTTTTCCGAACTTCTTTGTGAATGTACTTTTTCTGAGTTCTGATGTCACCTATTTAAGGCCTTCATCTTGTCAAATTGTTGACGAATGTGAATTTGCTCATCTATGCTGGCAGGCGCAACCTCGACAGCCTCTGCATGCTCATCGTTTGTGAGTAGGGAagttagtgtgtatgtgtgttgtagGTGTGTATGCCATAATTCTACCTTGTTTGTCAATTTGTGTCTACTACAGTTTGATTGATCCAGTTTAATTAGTGTGTATGTACTCAGtagtgtgtttgtctgttattagttatttggtggaaaaggggagagagatgagaggacatatacagtacattatcCAAAGCATCATAGATATTGTTTTTGGCTGCATCAAGTGTATGAATGTGCAGGATCATTTACAGTACTTCTAACAAAGCAGGGCACTTCACACAGACGTCTTAGTCTTAGCCGAACCCTGCCGACTACGCCAGTCCTGCTGCACAGCTTGAGCACAGCCTTTCTGTCCAATGAGATTTGACTTACTAAACCTCGAGCACTGTGATACTGCTCATGTGCCCCAATGAGAGCGACCCACGTTTACAAATACCAATACAACCAAGCATTGACTTAACCGAGCGAGAGAGAGTCCCTTCCTTTGTTTGAATGCTTTGTGTGTGAGGAGTTAAACAGCTTCCTTTACTTTCACTGAGGATTTATCACGTTTACGTACACTAGGCTGTACACTTCACCAATGAAAACACGTTTTCCAGTCCATGTATGATTTTTGCATGTAGATGAATGACTTGTTTTAATGCTGACTATGGAAGTTTCTTTTGCTTTCTTATTGATTTGTTTGGGGGACCATGTACAGTACTGAATACTATGGGGCAACCTTTCAGACCTCTTTCCACattgatattatatatacaaaaagtGTGTTTTCCCTATGGAGAAAGTTTACATTGTATATAGCCTGTAAATTTGGGGCTGCATAGATCTAACTGTCCATCTTATTAAAGTTATAAATGAAGAGGAAGATTGGAAATAAAGAGAACAATTGTTGAATATATAAAATCTTGTTACATTGCTA

Function

GO: NA

KEGG:

id description
K09115 MNT, ROX; MAX-binding protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU8810 lncRNA upstream 131391 25548738 ~ 25549685 (+) True G6464
TU8786 lncRNA upstream 177491 25503002 ~ 25503585 (+) True G6446
TU8784 lncRNA upstream 179891 25490214 ~ 25501185 (+) False G6445
TU8785 lncRNA upstream 179891 25499127 ~ 25501185 (+) True G6445
TU8778 lncRNA upstream 206890 25470677 ~ 25474186 (+) True G6441
TU8873 lncRNA downstream 83190 25796622 ~ 25797186 (+) True G6514
TU8875 lncRNA downstream 85486 25798918 ~ 25799741 (+) True G6516
XR_002650097.1 lncRNA downstream 150954 25864386 ~ 25887741 (+) False LOC111192696
TU8926 lncRNA downstream 151013 25864445 ~ 25888817 (+) True LOC111192696
TU8939 lncRNA downstream 247049 25960481 ~ 25997692 (+) True G6567
XM_022670724.1 mRNA upstream 4113 25626335 ~ 25676963 (+) False mettl16
XM_022670722.1 mRNA upstream 4113 25626336 ~ 25676963 (+) True mettl16
XM_007245916.3 mRNA upstream 56272 25586779 ~ 25624804 (+) True LOC103030333
XM_022670712.1 mRNA upstream 97095 25551222 ~ 25583981 (+) True cluh
XM_022670714.1 mRNA upstream 97095 25551222 ~ 25583981 (+) False cluh
XM_007245923.3 mRNA downstream 12737 25726169 ~ 25758766 (+) True vps53
XM_007245924.3 mRNA downstream 45503 25758935 ~ 25762483 (+) True rflnb
XM_007245926.3 mRNA downstream 51056 25764488 ~ 25774371 (+) True exo5
XM_007245927.3 mRNA downstream 101846 25815278 ~ 25826749 (+) True LOC103033293
XM_007245928.3 mRNA downstream 202805 25916237 ~ 25929253 (+) True aipl1
XR_002650083.1 other upstream 252725 25412194 ~ 25428351 (+) False LOC103027586
TU7890 other upstream 1773602 23878152 ~ 23907474 (+) True LOC103022942
TU7964 other upstream 1847246 23832236 ~ 23833830 (+) True G5871
TU7839 other upstream 2329770 23312512 ~ 23351306 (+) False G5797
TU8949 other downstream 326724 26040156 ~ 26046246 (+) True G6576
TU8950 other downstream 326724 26040156 ~ 26046246 (+) False G6576
TU8951 other downstream 329627 26043059 ~ 26046246 (+) False G6576
XR_002650136.1 other downstream 1205859 26919291 ~ 26931495 (+) False LOC103042574

Expression Profile