RNA id: XR_001518422.2



Basic Information


Item Value
RNA id XR_001518422.2
length 105
RNA type ncRNA
GC content 0.43
exon number 3
gene id LOC107197182
representative False

Chromosome Information


Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 4150003 ~ 4178426 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


TTATCTGATCCATTGGGGACATGGTGTGAAGAGaatccaatcaaatcaaatctagatgcttcatcagcagccagagaaagagcaaggtcaattgtgctctctcag

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU130696 lncRNA downstream 231647 3912009 ~ 3918356 (-) True G96996
TU130613 lncRNA downstream 266339 3878696 ~ 3883664 (-) False mboat1
TU130681 lncRNA downstream 285948 3858928 ~ 3864055 (-) True G96984
TU130680 lncRNA downstream 320266 3829008 ~ 3829737 (-) True G96983
TU130656 lncRNA downstream 496337 3653462 ~ 3653666 (-) True G96961
TU130888 lncRNA upstream 43107 4217314 ~ 4226794 (-) True G97143
TU130887 lncRNA upstream 45081 4219288 ~ 4221654 (-) True G97142
TU130901 lncRNA upstream 155503 4329710 ~ 4330114 (-) True G97155
TU130913 lncRNA upstream 173970 4348177 ~ 4348625 (-) True G97161
TU130909 lncRNA upstream 250447 4424654 ~ 4495490 (-) True G97158
XM_007239512.3 mRNA downstream 10097 4022224 ~ 4139906 (-) True lars2
XM_022674135.1 mRNA downstream 152089 3951098 ~ 3997914 (-) True limd1
XM_007239513.3 mRNA downstream 152092 3939150 ~ 3997911 (-) False limd1
XM_007232059.3 mRNA downstream 250755 3878696 ~ 3899248 (-) True mboat1
XM_022674132.1 mRNA downstream 559923 3583849 ~ 3590080 (-) True LOC111193417
XM_007228880.3 mRNA upstream 21766 4195973 ~ 4199792 (-) True clec3b
XM_022674138.1 mRNA upstream 54430 4228637 ~ 4267641 (-) True calb1
XM_022674036.1 mRNA upstream 197724 4371931 ~ 4394962 (-) True LOC103032754
XM_022674141.1 mRNA upstream 252344 4426551 ~ 4442953 (-) True aldh5a1
XM_007228873.3 mRNA upstream 270022 4444229 ~ 4453002 (-) False dek
XR_002650512.1 other downstream 1878426 2270503 ~ 2271577 (-) True LOC111193410
TU129943 other downstream 2335085 1811838 ~ 1814918 (-) False LOC103031019
XR_002650509.1 other downstream 3717610 431659 ~ 432393 (-) True LOC111193405
XR_002650507.1 other downstream 3718337 431162 ~ 431666 (-) True LOC111193404
TU129322 other downstream 3884419 252924 ~ 265584 (-) False LOC103043490
trnas-aga_10 other upstream 918679 5092886 ~ 5092967 (-) True trnas-aga_10
TU131662 other upstream 1404355 5578562 ~ 5586666 (-) True G97717
TU131666 other upstream 1416791 5590998 ~ 5593483 (-) False riiad1
TU131741 other upstream 1785114 5959321 ~ 6012419 (-) False LOC111193431
TU131744 other upstream 1796642 5970849 ~ 6012419 (-) False LOC111193431