RNA id: TU203263


Basic Information

Item Value
RNA id TU203263
length 313
lncRNA type inter_gene
GC content 0.32
exon number 2
gene id G150069
representative True

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 7679668 ~ 7740088 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

tatattccagaggttttaaaAATTGGTATTGATGCTACCTGGTTATTTTGAGAACTAATGCTGCCtggatatttaaatttgtcactGATTGGATAAATTACCATTTGCTACCAGAAAAGCTTTACAAGAACCCACAATGCATTCTAAAAGTCTCTGAAACTGCACTTGGGAAATGGATGTTCTCTTGTTATTTGTGGTGTTAAGGACCAACAAAAGCCGAAATCCACAATTGTCTTCATATGTTACTTATTTTTGTCAGATTTCtgatatatttagatattaaaAATCTGATATATCTCTTCACTCTTAACAC

Function

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0040008 regulation of growth biological_process
GO:0016049 cell growth biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203259 lncRNA upstream 19990 7654428 ~ 7659678 (+) True G150065
TU203253 lncRNA upstream 31782 7647623 ~ 7647886 (+) True G150060
TU203196 lncRNA upstream 295690 7374013 ~ 7383978 (+) True G150015
TU203182 lncRNA upstream 395332 7273205 ~ 7284336 (+) True G150002
TU203177 lncRNA upstream 425077 7253026 ~ 7254591 (+) True LOC111194505
TU203307 lncRNA downstream 66778 7806866 ~ 7807171 (+) True G150104
XR_002651110.1 lncRNA downstream 126022 7866110 ~ 7873133 (+) True LOC111194509
TU203342 lncRNA downstream 136107 7876195 ~ 7877950 (+) True G150132
TU203419 lncRNA downstream 228689 7968777 ~ 7969064 (+) True G150203
TU203412 lncRNA downstream 241006 7981094 ~ 7981400 (+) True G150196
XM_022678808.1 mRNA upstream 52128 7620597 ~ 7627540 (+) True neu4
XM_022678805.1 mRNA upstream 68057 7606489 ~ 7611611 (+) True srprb
XM_022678802.1 mRNA upstream 139532 7517007 ~ 7540136 (+) True LOC103022780
XM_007230633.3 mRNA downstream 81893 7821981 ~ 7837425 (+) True LOC103046888
XM_022678813.1 mRNA downstream 82122 7822210 ~ 7837425 (+) False LOC103046888
XM_022678815.1 mRNA downstream 251406 7991494 ~ 8017086 (+) True ap1m1
XM_022678816.1 mRNA downstream 253415 7993503 ~ 8017086 (+) False ap1m1
XM_007239950.3 mRNA downstream 436021 8176109 ~ 8179619 (+) True LOC103039989
XR_002651109.1 other upstream 428302 7249449 ~ 7251366 (+) False LOC111194506
TU203154 other upstream 731732 6943665 ~ 6947936 (+) False G149984
trnat-agu_11 other upstream 941634 6737961 ~ 6738034 (+) True trnat-agu_11
trnat-agu_10 other upstream 944500 6735095 ~ 6735168 (+) True trnat-agu_10
trnat-agu_9 other upstream 1130443 6549152 ~ 6549225 (+) True trnat-agu_9
TU203302 other downstream 29596 7769684 ~ 7805254 (+) True G150099
TU203337 other downstream 134552 7874640 ~ 7879301 (+) True G150131
TU203562 other downstream 908742 8648830 ~ 8656708 (+) True G150321
TU203913 other downstream 1815571 9555659 ~ 9567097 (+) True G150579
TU204035 other downstream 2111130 9851218 ~ 9852854 (+) True G150674

Expression Profile