Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007242241.3 |
| length | 770 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC103040403 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035913.1 |
| NCBI id | CM008316.1 |
| chromosome length | 28317440 |
| location | 10382880 ~ 10386158 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0008250 | oligosaccharyltransferase complex | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004579 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity | molecular_function |
| id | description |
|---|---|
| K12668 | OST2, DAD1; oligosaccharyltransferase complex subunit epsilon |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU204161 | lncRNA | upstream | 19505 | 10330746 ~ 10363375 (+) | False | LOC103040721 |
| TU204168 | lncRNA | upstream | 75475 | 10301373 ~ 10307405 (+) | True | G150757 |
| TU204163 | lncRNA | upstream | 101665 | 10280470 ~ 10281215 (+) | True | G150752 |
| TU204152 | lncRNA | upstream | 103050 | 10191520 ~ 10279830 (+) | False | LOC103021810 |
| TU204118 | lncRNA | upstream | 204403 | 10168326 ~ 10178477 (+) | True | G150735 |
| TU204192 | lncRNA | downstream | 28755 | 10414913 ~ 10434013 (+) | False | LOC111194616 |
| TU204400 | lncRNA | downstream | 125930 | 10512088 ~ 10515654 (+) | False | G150883 |
| TU204407 | lncRNA | downstream | 125930 | 10512088 ~ 10518923 (+) | True | G150883 |
| TU204410 | lncRNA | downstream | 128390 | 10514548 ~ 10518383 (+) | False | G150883 |
| TU204412 | lncRNA | downstream | 128390 | 10514548 ~ 10518923 (+) | False | G150883 |
| XM_022678898.1 | mRNA | upstream | 21412 | 10320269 ~ 10361468 (+) | True | LOC103040721 |
| XM_007241656.2 | mRNA | upstream | 175034 | 10193960 ~ 10207846 (+) | True | LOC103021810 |
| XM_022678883.1 | mRNA | upstream | 231369 | 10142124 ~ 10151511 (+) | False | LOC103031168 |
| XM_022678901.1 | mRNA | downstream | 4321 | 10390479 ~ 10407671 (+) | True | LOC111194532 |
| XM_022678902.1 | mRNA | downstream | 4321 | 10390479 ~ 10407671 (+) | False | LOC111194532 |
| XM_022679379.1 | mRNA | downstream | 23801 | 10409959 ~ 10436494 (+) | True | LOC111194616 |
| XM_022679380.1 | mRNA | downstream | 54565 | 10440723 ~ 10452490 (+) | True | LOC111194617 |
| XM_022678905.1 | mRNA | downstream | 171956 | 10558114 ~ 10583740 (+) | False | LOC103021908 |
| XR_002651121.1 | other | upstream | 230987 | 10142124 ~ 10151893 (+) | False | LOC103031168 |
| XR_002651122.1 | other | upstream | 231006 | 10142124 ~ 10151874 (+) | False | LOC103031168 |
| XR_002651120.1 | other | upstream | 232751 | 10142124 ~ 10150129 (+) | False | LOC103031168 |
| XR_002651123.1 | other | upstream | 234562 | 10142124 ~ 10148318 (+) | False | LOC103031168 |
| TU204035 | other | upstream | 530026 | 9851218 ~ 9852854 (+) | True | G150674 |
| TU204186 | other | downstream | 23635 | 10409793 ~ 10442243 (+) | False | LOC111194616 |
| XR_002651126.1 | other | downstream | 56832 | 10442990 ~ 10443712 (+) | True | LOC103024215 |
| TU204458 | other | downstream | 236501 | 10622659 ~ 10626011 (+) | False | mau2 |
| TU204536 | other | downstream | 354575 | 10740733 ~ 10741138 (+) | True | G150935 |
| TU204715 | other | downstream | 1166381 | 11552539 ~ 11561544 (+) | True | LOC103037021 |
