Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022678794.1 |
| length | 1096 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 4 |
| gene id | LOC111194503 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035913.1 |
| NCBI id | CM008316.1 |
| chromosome length | 28317440 |
| location | 6939059 ~ 6941197 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU203106 | lncRNA | upstream | 45408 | 6893316 ~ 6893651 (+) | True | G149960 |
| TU203089 | lncRNA | upstream | 111287 | 6769964 ~ 6827772 (+) | True | G149944 |
| TU203097 | lncRNA | upstream | 132017 | 6804479 ~ 6807042 (+) | True | G149952 |
| TU203077 | lncRNA | upstream | 175953 | 6753018 ~ 6763106 (+) | True | G149938 |
| TU203072 | lncRNA | upstream | 194034 | 6741526 ~ 6745025 (+) | True | G149934 |
| TU203172 | lncRNA | downstream | 307968 | 7249165 ~ 7251366 (+) | True | LOC111194506 |
| TU203177 | lncRNA | downstream | 311829 | 7253026 ~ 7254591 (+) | True | LOC111194505 |
| XR_002651108.1 | lncRNA | downstream | 311830 | 7253027 ~ 7254335 (+) | False | LOC111194505 |
| TU203182 | lncRNA | downstream | 332008 | 7273205 ~ 7284336 (+) | True | G150002 |
| TU203196 | lncRNA | downstream | 432816 | 7374013 ~ 7383978 (+) | True | G150015 |
| XM_022678793.1 | mRNA | upstream | 76 | 6935130 ~ 6938983 (+) | True | LOC111194502 |
| XM_007258400.3 | mRNA | upstream | 33418 | 6894328 ~ 6905641 (+) | True | nmd3 |
| XM_015608157.2 | mRNA | upstream | 33418 | 6894439 ~ 6905641 (+) | False | nmd3 |
| XM_022678787.1 | mRNA | upstream | 213714 | 6702236 ~ 6725345 (+) | False | smc4 |
| XM_007258396.3 | mRNA | upstream | 213911 | 6699726 ~ 6725148 (+) | True | smc4 |
| XM_022678795.1 | mRNA | downstream | 3292 | 6944489 ~ 6946968 (+) | True | LOC111194504 |
| XM_022678801.1 | mRNA | downstream | 575807 | 7517004 ~ 7540136 (+) | False | LOC103022780 |
| XM_022678802.1 | mRNA | downstream | 575810 | 7517007 ~ 7540136 (+) | True | LOC103022780 |
| XM_022678803.1 | mRNA | downstream | 584829 | 7526026 ~ 7540136 (+) | False | LOC103022780 |
| XM_007230642.3 | mRNA | downstream | 588343 | 7529540 ~ 7540136 (+) | False | LOC103022780 |
| trnat-agu_11 | other | upstream | 201025 | 6737961 ~ 6738034 (+) | True | trnat-agu_11 |
| trnat-agu_10 | other | upstream | 203891 | 6735095 ~ 6735168 (+) | True | trnat-agu_10 |
| trnat-agu_9 | other | upstream | 389834 | 6549152 ~ 6549225 (+) | True | trnat-agu_9 |
| trnat-agu_8 | other | upstream | 390230 | 6548756 ~ 6548829 (+) | True | trnat-agu_8 |
| trnat-agu_7 | other | upstream | 391312 | 6547674 ~ 6547747 (+) | True | trnat-agu_7 |
| TU203154 | other | downstream | 2468 | 6943665 ~ 6947936 (+) | False | G149984 |
| XR_002651109.1 | other | downstream | 308252 | 7249449 ~ 7251366 (+) | False | LOC111194506 |
| TU203302 | other | downstream | 828487 | 7769684 ~ 7805254 (+) | True | G150099 |
| TU203337 | other | downstream | 933443 | 7874640 ~ 7879301 (+) | True | G150131 |
| TU203562 | other | downstream | 1707633 | 8648830 ~ 8656708 (+) | True | G150321 |
