RNA id: trnal-uaa_36


Basic Information

Item Value
RNA id trnal-uaa_36
length 82
RNA type tRNA
GC content 0.51
exon number 1
gene id trnal-uaa_36
representative True

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4842469 ~ 4842550 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ACCTGGATGGCCGAGAGGTTAAGGCGTTGGACTTAAGATCCAATGATGTAAATCCACGTGGGTTCGAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU202260 lncRNA upstream 2128 4840115 ~ 4840341 (+) True G149357
TU202170 lncRNA upstream 29755 4498021 ~ 4812714 (+) False G149302
TU202141 lncRNA upstream 30565 4498809 ~ 4811904 (+) False G149302
TU202145 lncRNA upstream 30565 4501889 ~ 4811904 (+) False G149302
TU202135 lncRNA upstream 32443 4497244 ~ 4810026 (+) False G149302
TU202270 lncRNA downstream 64867 4907417 ~ 4909831 (+) True G149366
TU202558 lncRNA downstream 88263 4930813 ~ 4932837 (+) True G149571
TU202560 lncRNA downstream 90414 4932964 ~ 4934234 (+) True G149572
TU202562 lncRNA downstream 119540 4962090 ~ 5037794 (+) True G149574
TU202599 lncRNA downstream 269386 5111936 ~ 5112808 (+) False LOC111194607
XM_022678722.1 mRNA upstream 78740 4684608 ~ 4763729 (+) True LOC111194485
XM_022678723.1 mRNA upstream 78740 4684609 ~ 4763729 (+) False LOC111194485
XM_022678724.1 mRNA upstream 78740 4684610 ~ 4763729 (+) False LOC111194485
XM_022678725.1 mRNA upstream 78740 4684611 ~ 4763729 (+) False LOC111194485
XM_022678721.1 mRNA upstream 220757 4584313 ~ 4621712 (+) True LOC103045023
XM_022678736.1 mRNA downstream 6603 4849153 ~ 4876388 (+) False LOC103027894
XM_022678738.1 mRNA downstream 6603 4849153 ~ 4876388 (+) False LOC103027894
XM_022678733.1 mRNA downstream 6625 4849175 ~ 4876388 (+) False LOC103027894
XM_022678734.1 mRNA downstream 6627 4849177 ~ 4876388 (+) False LOC103027894
XM_022678735.1 mRNA downstream 6658 4849208 ~ 4876388 (+) True LOC103027894
trnal-uaa_35 other upstream 282454 4559933 ~ 4560015 (+) True trnal-uaa_35
trnal-uaa_34 other upstream 283121 4559266 ~ 4559348 (+) True trnal-uaa_34
trnal-uaa_33 other upstream 283404 4558983 ~ 4559065 (+) True trnal-uaa_33
trnal-uaa_32 other upstream 283912 4558475 ~ 4558557 (+) True trnal-uaa_32
trnal-uaa_31 other upstream 284241 4558146 ~ 4558228 (+) True trnal-uaa_31
trnal-uaa_37 other downstream 109 4842659 ~ 4842741 (+) True trnal-uaa_37
trnal-uaa_38 other downstream 300 4842850 ~ 4842932 (+) True trnal-uaa_38
trnal-uaa_39 other downstream 490 4843040 ~ 4843122 (+) True trnal-uaa_39
trnal-uaa_40 other downstream 681 4843231 ~ 4843313 (+) True trnal-uaa_40
trnal-uaa_41 other downstream 1044 4843594 ~ 4843739 (+) True trnal-uaa_41