RNA id: TU210419


Basic Information

Item Value
RNA id TU210419
length 203
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G155217
representative True

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 211852 ~ 212054 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gagccgcgcttctatcggctctgaacgcggttagcccggctagctgaatggcgctgtccggaatgttgtcgttaagccacgattccacaaaaaccaaaacacagcagtctctgaactcacgctgggttgttcgctggagtcggatgtagtccagtttattgtcaagggaacagacgtttgcaagaaagagcgatggtatagcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210363 lncRNA upstream 165054 46589 ~ 46798 (+) True G155189
XR_454944.3 lncRNA upstream 193629 4453 ~ 18223 (+) True LOC103036280
TU210434 lncRNA downstream 76687 288741 ~ 288965 (+) True G155230
TU210432 lncRNA downstream 115369 327423 ~ 329164 (+) True G155229
TU210445 lncRNA downstream 118783 330837 ~ 331274 (+) True G155234
TU210440 lncRNA downstream 132909 344963 ~ 360697 (+) False G155233
TU210439 lncRNA downstream 132964 345018 ~ 350247 (+) False G155233
XM_022679438.1 mRNA downstream 209474 421528 ~ 537878 (+) True LOC103033531
XM_007251567.3 mRNA downstream 339875 551929 ~ 563776 (+) True LOC103040340
XM_007251642.2 mRNA downstream 466941 678995 ~ 681903 (+) True LOC103034482
XM_007251569.3 mRNA downstream 492301 704355 ~ 713021 (+) True blvrb
XM_007251568.3 mRNA downstream 501855 713909 ~ 718705 (+) True sertad3
TU210384 other upstream 58589 149347 ~ 153263 (+) True G155206
TU210867 other downstream 991687 1203741 ~ 1214663 (+) False LOC103036073
TU210855 other downstream 1053766 1265820 ~ 1269379 (+) False G155491
TU210857 other downstream 1053766 1265820 ~ 1268195 (+) False G155491
TU210859 other downstream 1053766 1265820 ~ 1268195 (+) False G155491
TU211262 other downstream 2526307 2738361 ~ 2755112 (+) True G155776

Expression Profile