RNA id: TU210470


Basic Information

Item Value
RNA id TU210470
length 295
lncRNA type inter_gene
GC content 0.60
exon number 2
gene id G155250
representative True

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 395765 ~ 399614 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

CCTCCAGCTCAGTCAGTCTCTGGGTCAGTGATTGGTCAGCAGGTGGTTCTTCAGGTGAGCCTCCAGGTGCTGCAGGCTGAGTGGAGGATTTACTCATGACCTCCAGCTGAGCCCGCAGGACCTGCTCCTTCTCCGACATCTCGCTCTCGTGTTTCTCCACCGCCCTCCTCAGCTCCGCCTGGTGTTTCTCCATCAGGTCTCGAACCTGAGTGCGCATGATGTGCCTCTCCGCCTCCATCTTAGAGTGCAGGTTCTCCTTCTCGCTCTGCAGGAGCCGCATTCGCTCCGCCAGCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210440 lncRNA upstream 35068 344963 ~ 360697 (+) False G155233
TU210439 lncRNA upstream 45518 345018 ~ 350247 (+) False G155233
TU210443 lncRNA upstream 45518 345018 ~ 350247 (+) False G155233
TU210444 lncRNA upstream 45518 345018 ~ 350247 (+) True G155233
TU210445 lncRNA upstream 64491 330837 ~ 331274 (+) True G155234
TU210557 lncRNA downstream 93797 493411 ~ 497140 (+) True G155290
TU210550 lncRNA downstream 188228 587842 ~ 590204 (+) True G155283
TU210572 lncRNA downstream 192060 591674 ~ 593996 (+) True G155300
TU210608 lncRNA downstream 295912 695526 ~ 703112 (+) True G155328
TU210615 lncRNA downstream 320681 720295 ~ 724186 (+) True G155332
XM_022679438.1 mRNA downstream 21914 421528 ~ 537878 (+) True LOC103033531
XM_007251567.3 mRNA downstream 152315 551929 ~ 563776 (+) True LOC103040340
XM_007251642.2 mRNA downstream 279381 678995 ~ 681903 (+) True LOC103034482
XM_007251569.3 mRNA downstream 304741 704355 ~ 713021 (+) True blvrb
XM_007251568.3 mRNA downstream 314295 713909 ~ 718705 (+) True sertad3
TU210384 other upstream 242502 149347 ~ 153263 (+) True G155206
TU210867 other downstream 804127 1203741 ~ 1214663 (+) False LOC103036073
TU210855 other downstream 866206 1265820 ~ 1269379 (+) False G155491
TU210857 other downstream 866206 1265820 ~ 1268195 (+) False G155491
TU210859 other downstream 866206 1265820 ~ 1268195 (+) False G155491
TU211262 other downstream 2338747 2738361 ~ 2755112 (+) True G155776

Expression Profile