Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU211355 |
| length | 1260 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | LOC111194715 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 3029575 ~ 3030986 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU211350 | lncRNA | upstream | 38276 | 2990959 ~ 2991367 (+) | True | G155854 |
| TU211296 | lncRNA | upstream | 201369 | 2827596 ~ 2828274 (+) | True | G155809 |
| TU211279 | lncRNA | upstream | 249272 | 2780128 ~ 2780371 (+) | True | G155793 |
| TU211278 | lncRNA | upstream | 249760 | 2779587 ~ 2779883 (+) | True | G155792 |
| TU211271 | lncRNA | upstream | 258790 | 2770090 ~ 2770853 (+) | True | G155785 |
| TU211364 | lncRNA | downstream | 89049 | 3120035 ~ 3121160 (+) | True | G155866 |
| TU211470 | lncRNA | downstream | 583148 | 3614134 ~ 3614363 (+) | False | LOC111194753 |
| TU211478 | lncRNA | downstream | 645646 | 3676632 ~ 3676857 (+) | True | G155956 |
| TU211494 | lncRNA | downstream | 737587 | 3768573 ~ 3769327 (+) | True | G155967 |
| TU211503 | lncRNA | downstream | 815863 | 3846849 ~ 3847617 (+) | True | G155976 |
| XM_007230030.2 | mRNA | upstream | 66092 | 2942774 ~ 2963551 (+) | True | ndufa10 |
| XM_015606067.2 | mRNA | upstream | 91573 | 2882827 ~ 2938070 (+) | True | LOC103044837 |
| XM_022679486.1 | mRNA | upstream | 222889 | 2792039 ~ 2806754 (+) | True | parp9 |
| XM_022679487.1 | mRNA | upstream | 222889 | 2792630 ~ 2806754 (+) | False | parp9 |
| XM_007243989.3 | mRNA | upstream | 313919 | 2671503 ~ 2715724 (+) | False | lrch3 |
| XM_022679492.1 | mRNA | downstream | 580032 | 3611018 ~ 3614491 (+) | True | LOC111194753 |
| XM_015601072.2 | mRNA | downstream | 827520 | 3858506 ~ 3899215 (+) | True | LOC103025504 |
| XM_022679493.1 | mRNA | downstream | 829672 | 3860658 ~ 3899215 (+) | False | LOC103025504 |
| XM_007232420.3 | mRNA | downstream | 898345 | 3929331 ~ 3932163 (+) | True | LOC103025196 |
| XM_022679498.1 | mRNA | downstream | 946766 | 3977752 ~ 3999462 (+) | True | LOC103036562 |
| TU211262 | other | upstream | 274531 | 2738361 ~ 2755112 (+) | True | G155776 |
| TU210855 | other | upstream | 1760264 | 1265820 ~ 1269379 (+) | False | G155491 |
| TU210857 | other | upstream | 1761448 | 1265820 ~ 1268195 (+) | False | G155491 |
| TU210859 | other | upstream | 1761448 | 1265820 ~ 1268195 (+) | False | G155491 |
| TU210867 | other | upstream | 1814980 | 1203741 ~ 1214663 (+) | False | LOC103036073 |
| TU211750 | other | downstream | 2126168 | 5157154 ~ 5157400 (+) | True | G156188 |
| TU212485 | other | downstream | 4341390 | 7372376 ~ 7431568 (+) | False | LOC111194759 |
| TU212490 | other | downstream | 4356516 | 7387502 ~ 7404556 (+) | False | LOC111194759 |
| TU212659 | other | downstream | 4569581 | 7600567 ~ 7606668 (+) | True | G156840 |
| TU212948 | other | downstream | 5538944 | 8569930 ~ 8570877 (+) | True | G157055 |
