Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU215250 |
| length | 655 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G158786 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 16574684 ~ 16575374 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU215247 | lncRNA | upstream | 13674 | 16542878 ~ 16561010 (+) | False | siah1 |
| TU215234 | lncRNA | upstream | 283677 | 16290776 ~ 16291007 (+) | True | G158776 |
| TU215066 | lncRNA | upstream | 595315 | 15979026 ~ 15979369 (+) | True | G158652 |
| TU215060 | lncRNA | upstream | 595738 | 15976852 ~ 15978946 (+) | True | G158651 |
| TU215262 | lncRNA | downstream | 12553 | 16587927 ~ 16588472 (+) | True | G158793 |
| TU215287 | lncRNA | downstream | 78762 | 16654136 ~ 16725205 (+) | False | st3gal2 |
| TU215301 | lncRNA | downstream | 153082 | 16728456 ~ 16730115 (+) | True | G158823 |
| TU215291 | lncRNA | downstream | 163098 | 16738472 ~ 16738877 (+) | True | G158818 |
| TU215319 | lncRNA | downstream | 199306 | 16774680 ~ 16777218 (+) | True | G158837 |
| XM_007249183.2 | mRNA | upstream | 3226 | 16542894 ~ 16571458 (+) | False | siah1 |
| XM_007249181.3 | mRNA | upstream | 3226 | 16558042 ~ 16571458 (+) | True | siah1 |
| XM_007249182.3 | mRNA | upstream | 3226 | 16558042 ~ 16571458 (+) | False | siah1 |
| XM_007249184.3 | mRNA | upstream | 44089 | 16512334 ~ 16530595 (+) | True | n4bp1 |
| XM_015604415.2 | mRNA | upstream | 63375 | 16506896 ~ 16511309 (+) | True | LOC107197482 |
| XM_007249175.3 | mRNA | downstream | 122226 | 16697600 ~ 16725209 (+) | True | st3gal2 |
| XM_007249169.3 | mRNA | downstream | 188658 | 16764032 ~ 16773000 (+) | True | pllp |
| XM_007249167.3 | mRNA | downstream | 204132 | 16779506 ~ 16798400 (+) | True | LOC103031606 |
| XM_007249163.3 | mRNA | downstream | 267287 | 16842661 ~ 16852459 (+) | True | hacd3 |
| XM_022679664.1 | mRNA | downstream | 284518 | 16859892 ~ 16884155 (+) | True | slc24a1 |
| TU215237 | other | upstream | 194861 | 16379259 ~ 16379823 (+) | True | G158779 |
| TU214761 | other | upstream | 1438486 | 15128368 ~ 15136198 (+) | False | LOC111194769 |
| TU214762 | other | upstream | 1438486 | 15128368 ~ 15136198 (+) | False | LOC111194769 |
| TU214760 | other | upstream | 1438486 | 15133947 ~ 15136198 (+) | False | LOC111194769 |
| TU214707 | other | upstream | 1523966 | 15050222 ~ 15050718 (+) | True | G158369 |
| trnal-cag_11 | other | downstream | 188152 | 16763526 ~ 16763608 (+) | True | trnal-cag_11 |
| XR_002651250.1 | other | downstream | 602301 | 17177675 ~ 17189251 (+) | False | zwilch |
| XR_002651251.1 | other | downstream | 602301 | 17177675 ~ 17189251 (+) | True | zwilch |
| TU215929 | other | downstream | 1951012 | 18526386 ~ 18576437 (+) | True | necab2 |
| TU215930 | other | downstream | 1951012 | 18526386 ~ 18576437 (+) | False | necab2 |
