Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU215301 |
| length | 772 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 5 |
| gene id | G158823 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 16728456 ~ 16730115 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU215287 | lncRNA | upstream | 3251 | 16654136 ~ 16725205 (+) | False | st3gal2 |
| TU215262 | lncRNA | upstream | 139984 | 16587927 ~ 16588472 (+) | True | G158793 |
| TU215250 | lncRNA | upstream | 153082 | 16574684 ~ 16575374 (+) | True | G158786 |
| TU215247 | lncRNA | upstream | 167446 | 16542878 ~ 16561010 (+) | False | siah1 |
| TU215234 | lncRNA | upstream | 437449 | 16290776 ~ 16291007 (+) | True | G158776 |
| TU215291 | lncRNA | downstream | 8357 | 16738472 ~ 16738877 (+) | True | G158818 |
| TU215319 | lncRNA | downstream | 44565 | 16774680 ~ 16777218 (+) | True | G158837 |
| TU215317 | lncRNA | downstream | 65618 | 16795733 ~ 16798375 (+) | False | LOC103031606 |
| XR_002651249.1 | lncRNA | downstream | 87120 | 16817235 ~ 16821091 (+) | True | LOC111194771 |
| TU215334 | lncRNA | downstream | 106598 | 16836713 ~ 16840357 (+) | True | G158852 |
| XM_007249175.3 | mRNA | upstream | 3247 | 16697600 ~ 16725209 (+) | True | st3gal2 |
| XM_007249183.2 | mRNA | upstream | 156998 | 16542894 ~ 16571458 (+) | False | siah1 |
| XM_007249181.3 | mRNA | upstream | 156998 | 16558042 ~ 16571458 (+) | True | siah1 |
| XM_007249182.3 | mRNA | upstream | 156998 | 16558042 ~ 16571458 (+) | False | siah1 |
| XM_007249184.3 | mRNA | upstream | 197861 | 16512334 ~ 16530595 (+) | True | n4bp1 |
| XM_007249169.3 | mRNA | downstream | 33917 | 16764032 ~ 16773000 (+) | True | pllp |
| XM_007249167.3 | mRNA | downstream | 49391 | 16779506 ~ 16798400 (+) | True | LOC103031606 |
| XM_007249163.3 | mRNA | downstream | 112546 | 16842661 ~ 16852459 (+) | True | hacd3 |
| XM_022679664.1 | mRNA | downstream | 129777 | 16859892 ~ 16884155 (+) | True | slc24a1 |
| XM_007249161.3 | mRNA | downstream | 129778 | 16859893 ~ 16884155 (+) | False | slc24a1 |
| TU215237 | other | upstream | 348633 | 16379259 ~ 16379823 (+) | True | G158779 |
| TU214761 | other | upstream | 1592258 | 15128368 ~ 15136198 (+) | False | LOC111194769 |
| TU214762 | other | upstream | 1592258 | 15128368 ~ 15136198 (+) | False | LOC111194769 |
| TU214760 | other | upstream | 1592258 | 15133947 ~ 15136198 (+) | False | LOC111194769 |
| TU214707 | other | upstream | 1677738 | 15050222 ~ 15050718 (+) | True | G158369 |
| trnal-cag_11 | other | downstream | 33411 | 16763526 ~ 16763608 (+) | True | trnal-cag_11 |
| XR_002651250.1 | other | downstream | 447560 | 17177675 ~ 17189251 (+) | False | zwilch |
| XR_002651251.1 | other | downstream | 447560 | 17177675 ~ 17189251 (+) | True | zwilch |
| TU215929 | other | downstream | 1796271 | 18526386 ~ 18576437 (+) | True | necab2 |
| TU215930 | other | downstream | 1796271 | 18526386 ~ 18576437 (+) | False | necab2 |
