Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU217654 |
| length | 849 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 8 |
| gene id | G160617 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 25594952 ~ 25599301 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU217588 | lncRNA | upstream | 48962 | 25540409 ~ 25546750 (+) | True | G160576 |
| TU217527 | lncRNA | upstream | 175773 | 25417643 ~ 25419939 (+) | True | G160543 |
| TU217493 | lncRNA | upstream | 215219 | 25323403 ~ 25380493 (+) | True | G160518 |
| TU217332 | lncRNA | upstream | 547134 | 25047099 ~ 25048578 (+) | False | G160384 |
| TU217331 | lncRNA | upstream | 547176 | 25047099 ~ 25048536 (+) | False | G160384 |
| TU217651 | lncRNA | downstream | 12415 | 25611716 ~ 25613928 (+) | False | G160616 |
| TU217652 | lncRNA | downstream | 14285 | 25613586 ~ 25615298 (+) | True | G160616 |
| TU217720 | lncRNA | downstream | 105216 | 25704517 ~ 25706252 (+) | True | G160647 |
| TU217727 | lncRNA | downstream | 139486 | 25738787 ~ 25739361 (+) | True | G160654 |
| XR_002651266.1 | lncRNA | downstream | 239137 | 25838438 ~ 25842937 (+) | True | LOC111194781 |
| XM_022679982.1 | mRNA | upstream | 1458 | 25593386 ~ 25594254 (+) | True | LOC111194838 |
| XM_007235662.3 | mRNA | upstream | 9018 | 25581159 ~ 25586694 (+) | True | LOC103039536 |
| XM_022679775.1 | mRNA | upstream | 9018 | 25582844 ~ 25586694 (+) | False | LOC103039536 |
| XM_007235660.3 | mRNA | upstream | 19615 | 25566292 ~ 25576097 (+) | True | ehd2 |
| XM_007235670.3 | mRNA | downstream | 33283 | 25632584 ~ 25643495 (+) | True | LOC103041999 |
| XM_007235675.3 | mRNA | downstream | 65485 | 25664786 ~ 25686023 (+) | False | LOC103042827 |
| XM_007235673.3 | mRNA | downstream | 65486 | 25664787 ~ 25686023 (+) | True | LOC103042827 |
| XM_007235674.3 | mRNA | downstream | 65486 | 25664787 ~ 25686023 (+) | False | LOC103042827 |
| XM_007235680.3 | mRNA | downstream | 89952 | 25689253 ~ 25838066 (+) | True | frmd5 |
| TU217233 | other | upstream | 1475887 | 24119129 ~ 24119825 (+) | True | G160306 |
| TU217011 | other | upstream | 2741631 | 22853412 ~ 22854081 (+) | True | G160134 |
| XR_002651264.1 | other | upstream | 2972405 | 22622839 ~ 22623307 (+) | True | LOC111194779 |
| TU216738 | other | upstream | 3442927 | 22147844 ~ 22152785 (+) | True | G159926 |
| TU216515 | other | upstream | 4583918 | 21009302 ~ 21011794 (+) | True | G159748 |
| TU217966 | other | downstream | 1150078 | 26749379 ~ 26755313 (+) | False | LOC103021732 |
| TU218064 | other | downstream | 1305943 | 26905244 ~ 26907627 (+) | True | G160919 |
| XR_002651269.1 | other | downstream | 1510370 | 27109671 ~ 27117211 (+) | False | ccnl1 |
| TU218548 | other | downstream | 3022827 | 28622128 ~ 28624785 (+) | True | G161292 |
| XR_002651275.1 | other | downstream | 3146395 | 28745696 ~ 28759007 (+) | False | fam219b |
