Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU218294 |
| length | 852 |
| lncRNA type | sense_over |
| GC content | 0.54 |
| exon number | 5 |
| gene id | c18h3orf33 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 27784896 ~ 27796504 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU218293 | lncRNA | upstream | 1843 | 27780854 ~ 27783189 (+) | True | G161115 |
| TU218251 | lncRNA | upstream | 157610 | 27602859 ~ 27627422 (+) | True | G161080 |
| TU218250 | lncRNA | upstream | 198262 | 27586529 ~ 27586770 (+) | True | G161079 |
| TU218231 | lncRNA | upstream | 383845 | 27400961 ~ 27401187 (+) | True | G161060 |
| TU218184 | lncRNA | upstream | 445858 | 27338127 ~ 27339174 (+) | False | G161017 |
| TU218309 | lncRNA | downstream | 97444 | 27893087 ~ 27893477 (+) | True | G161129 |
| TU218351 | lncRNA | downstream | 234970 | 28030613 ~ 28035195 (+) | True | LOC111194734 |
| XR_002651201.1 | lncRNA | downstream | 235216 | 28030859 ~ 28032190 (+) | False | LOC111194734 |
| TU218353 | lncRNA | downstream | 235755 | 28031398 ~ 28032184 (+) | False | LOC111194734 |
| TU218493 | lncRNA | downstream | 570525 | 28366168 ~ 28394028 (+) | False | G161243 |
| XM_015600826.2 | mRNA | upstream | 6566 | 27762391 ~ 27778466 (+) | False | slc33a1 |
| XM_007231546.3 | mRNA | upstream | 6566 | 27762407 ~ 27778466 (+) | True | slc33a1 |
| XM_007232086.2 | mRNA | upstream | 355251 | 27423510 ~ 27429781 (+) | True | ssr3 |
| XM_022679793.1 | mRNA | upstream | 581122 | 27202494 ~ 27203910 (+) | True | LOC111194784 |
| XM_007232092.3 | mRNA | upstream | 665768 | 27109672 ~ 27119264 (+) | True | ccnl1 |
| XM_022679983.1 | mRNA | downstream | 9420 | 27805063 ~ 27965690 (+) | True | plch1 |
| XM_007231544.3 | mRNA | downstream | 173415 | 27969058 ~ 27977682 (+) | True | LOC103040346 |
| XM_007231561.2 | mRNA | downstream | 275848 | 28071491 ~ 28077732 (+) | True | LOC103045576 |
| XM_022679804.1 | mRNA | downstream | 377967 | 28173610 ~ 28177986 (+) | True | LOC107196882 |
| XM_022679806.1 | mRNA | downstream | 378192 | 28173835 ~ 28177986 (+) | False | LOC107196882 |
| XR_002651269.1 | other | upstream | 667821 | 27109671 ~ 27117211 (+) | False | ccnl1 |
| TU218064 | other | upstream | 877405 | 26905244 ~ 26907627 (+) | True | G160919 |
| TU217966 | other | upstream | 1029719 | 26749379 ~ 26755313 (+) | False | LOC103021732 |
| TU217233 | other | upstream | 3665207 | 24119129 ~ 24119825 (+) | True | G160306 |
| TU217011 | other | upstream | 4930951 | 22853412 ~ 22854081 (+) | True | G160134 |
| TU218548 | other | downstream | 826485 | 28622128 ~ 28624785 (+) | True | G161292 |
| XR_002651275.1 | other | downstream | 950053 | 28745696 ~ 28759007 (+) | False | fam219b |
| TU218604 | other | downstream | 1275177 | 29070820 ~ 29116795 (+) | True | G161331 |
| XR_002651288.1 | other | downstream | 3079395 | 30875038 ~ 30878327 (+) | True | hmgn2 |
| TU219178 | other | downstream | 3079475 | 30875118 ~ 30878312 (+) | False | hmgn2 |
