Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU219056 |
| length | 1213 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 3 |
| gene id | LOC111194810 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 30277327 ~ 30287684 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU219053 | lncRNA | upstream | 494 | 30276586 ~ 30276833 (+) | True | G161686 |
| TU219050 | lncRNA | upstream | 24830 | 30252102 ~ 30252497 (+) | True | G161683 |
| TU219049 | lncRNA | upstream | 25322 | 30251582 ~ 30252005 (+) | True | G161682 |
| TU219044 | lncRNA | upstream | 60523 | 30216502 ~ 30216804 (+) | True | G161677 |
| TU218984 | lncRNA | upstream | 63426 | 30162104 ~ 30213901 (+) | False | G161622 |
| TU219066 | lncRNA | downstream | 16066 | 30303750 ~ 30309405 (+) | True | G161692 |
| TU219069 | lncRNA | downstream | 27923 | 30315607 ~ 30321928 (+) | True | G161695 |
| TU219070 | lncRNA | downstream | 30737 | 30318421 ~ 30321928 (+) | False | G161695 |
| TU219072 | lncRNA | downstream | 36476 | 30324160 ~ 30325854 (+) | True | G161696 |
| TU219075 | lncRNA | downstream | 45538 | 30333222 ~ 30335308 (+) | True | G161697 |
| XM_022679857.1 | mRNA | upstream | 174350 | 30090299 ~ 30102977 (+) | True | LOC103035823 |
| XM_022679845.1 | mRNA | upstream | 188617 | 30036411 ~ 30088710 (+) | True | LOC103042250 |
| XM_022679834.1 | mRNA | upstream | 249579 | 29901316 ~ 30027748 (+) | False | myo5a |
| XM_022679847.1 | mRNA | downstream | 66002 | 30353686 ~ 30414204 (+) | True | LOC103042463 |
| XM_022679848.1 | mRNA | downstream | 82971 | 30370655 ~ 30414204 (+) | False | LOC103042463 |
| XM_022679856.1 | mRNA | downstream | 143763 | 30431447 ~ 30441876 (+) | True | lysmd2 |
| XM_022679851.1 | mRNA | downstream | 374198 | 30661882 ~ 30672269 (+) | True | LOC111194807 |
| XM_022679852.1 | mRNA | downstream | 374198 | 30661882 ~ 30672269 (+) | False | LOC111194807 |
| TU218604 | other | upstream | 1160532 | 29070820 ~ 29116795 (+) | True | G161331 |
| XR_002651275.1 | other | upstream | 1518320 | 28745696 ~ 28759007 (+) | False | fam219b |
| TU218548 | other | upstream | 1652542 | 28622128 ~ 28624785 (+) | True | G161292 |
| XR_002651269.1 | other | upstream | 3160116 | 27109671 ~ 27117211 (+) | False | ccnl1 |
| TU218064 | other | upstream | 3369700 | 26905244 ~ 26907627 (+) | True | G160919 |
| XR_002651288.1 | other | downstream | 587354 | 30875038 ~ 30878327 (+) | True | hmgn2 |
| TU219178 | other | downstream | 587434 | 30875118 ~ 30878312 (+) | False | hmgn2 |
| TU219179 | other | downstream | 587434 | 30875118 ~ 30878312 (+) | False | hmgn2 |
| TU219503 | other | downstream | 1781178 | 32068862 ~ 32148190 (+) | True | G162017 |
| TU219521 | other | downstream | 1948632 | 32236316 ~ 32295029 (+) | True | G162032 |
