Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU219075 |
| length | 838 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 3 |
| gene id | G161697 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 30333222 ~ 30335308 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU219072 | lncRNA | upstream | 7368 | 30324160 ~ 30325854 (+) | True | G161696 |
| TU219069 | lncRNA | upstream | 11294 | 30315607 ~ 30321928 (+) | True | G161695 |
| TU219070 | lncRNA | upstream | 11294 | 30318421 ~ 30321928 (+) | False | G161695 |
| TU219066 | lncRNA | upstream | 23817 | 30303750 ~ 30309405 (+) | True | G161692 |
| TU219060 | lncRNA | upstream | 45538 | 30277327 ~ 30287684 (+) | False | LOC111194810 |
| TU219077 | lncRNA | downstream | 61628 | 30396936 ~ 30414212 (+) | False | LOC103042463 |
| TU219139 | lncRNA | downstream | 301749 | 30637057 ~ 30637297 (+) | True | G161745 |
| TU219140 | lncRNA | downstream | 325012 | 30660320 ~ 30660727 (+) | True | G161746 |
| TU219151 | lncRNA | downstream | 354407 | 30689715 ~ 30689944 (+) | True | G161755 |
| TU219150 | lncRNA | downstream | 360231 | 30695539 ~ 30696723 (+) | True | G161754 |
| XM_022679857.1 | mRNA | upstream | 230245 | 30090299 ~ 30102977 (+) | True | LOC103035823 |
| XM_022679845.1 | mRNA | upstream | 244512 | 30036411 ~ 30088710 (+) | True | LOC103042250 |
| XM_022679834.1 | mRNA | upstream | 305474 | 29901316 ~ 30027748 (+) | False | myo5a |
| XM_022679847.1 | mRNA | downstream | 18378 | 30353686 ~ 30414204 (+) | True | LOC103042463 |
| XM_022679848.1 | mRNA | downstream | 35347 | 30370655 ~ 30414204 (+) | False | LOC103042463 |
| XM_022679856.1 | mRNA | downstream | 96139 | 30431447 ~ 30441876 (+) | True | lysmd2 |
| XM_022679851.1 | mRNA | downstream | 326574 | 30661882 ~ 30672269 (+) | True | LOC111194807 |
| XM_022679852.1 | mRNA | downstream | 326574 | 30661882 ~ 30672269 (+) | False | LOC111194807 |
| TU218604 | other | upstream | 1216427 | 29070820 ~ 29116795 (+) | True | G161331 |
| XR_002651275.1 | other | upstream | 1574215 | 28745696 ~ 28759007 (+) | False | fam219b |
| TU218548 | other | upstream | 1708437 | 28622128 ~ 28624785 (+) | True | G161292 |
| XR_002651269.1 | other | upstream | 3216011 | 27109671 ~ 27117211 (+) | False | ccnl1 |
| TU218064 | other | upstream | 3425595 | 26905244 ~ 26907627 (+) | True | G160919 |
| XR_002651288.1 | other | downstream | 539730 | 30875038 ~ 30878327 (+) | True | hmgn2 |
| TU219178 | other | downstream | 539810 | 30875118 ~ 30878312 (+) | False | hmgn2 |
| TU219179 | other | downstream | 539810 | 30875118 ~ 30878312 (+) | False | hmgn2 |
| TU219503 | other | downstream | 1733554 | 32068862 ~ 32148190 (+) | True | G162017 |
| TU219521 | other | downstream | 1901008 | 32236316 ~ 32295029 (+) | True | G162032 |
