Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU219251 |
| length | 569 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 4 |
| gene id | G161834 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 31372977 ~ 31528197 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU219244 | lncRNA | upstream | 61174 | 31311531 ~ 31311803 (+) | True | G161831 |
| TU219239 | lncRNA | upstream | 126100 | 31246081 ~ 31246877 (+) | True | G161826 |
| TU219231 | lncRNA | upstream | 152794 | 31219338 ~ 31220183 (+) | True | G161818 |
| TU219228 | lncRNA | upstream | 173230 | 31192281 ~ 31199747 (+) | True | G161816 |
| TU219217 | lncRNA | upstream | 182728 | 31099568 ~ 31190249 (+) | True | G161808 |
| TU219267 | lncRNA | downstream | 27232 | 31555429 ~ 31559544 (+) | True | G161847 |
| TU219272 | lncRNA | downstream | 42897 | 31571094 ~ 31573854 (+) | True | G161849 |
| TU219274 | lncRNA | downstream | 74810 | 31603007 ~ 31605486 (+) | False | efhb |
| TU219485 | lncRNA | downstream | 308029 | 31836226 ~ 31836672 (+) | True | G162001 |
| TU219487 | lncRNA | downstream | 343826 | 31872023 ~ 31872277 (+) | True | G162003 |
| XM_022679862.1 | mRNA | upstream | 117669 | 31164038 ~ 31255308 (+) | True | slc9a1 |
| XM_015602154.2 | mRNA | upstream | 389117 | 30971172 ~ 30983860 (+) | True | LOC103039032 |
| XM_007236248.3 | mRNA | upstream | 494650 | 30875065 ~ 30878327 (+) | False | hmgn2 |
| XM_015602150.2 | mRNA | upstream | 505489 | 30854558 ~ 30867488 (+) | False | dhdds |
| XM_022679866.1 | mRNA | downstream | 56549 | 31584746 ~ 31605490 (+) | True | efhb |
| XM_015601104.2 | mRNA | downstream | 159855 | 31688052 ~ 31802563 (+) | False | satb1 |
| XM_022679867.1 | mRNA | downstream | 166269 | 31694466 ~ 31802563 (+) | False | satb1 |
| XM_015601103.2 | mRNA | downstream | 179944 | 31708141 ~ 31802563 (+) | True | satb1 |
| XM_022679868.1 | mRNA | downstream | 186715 | 31714912 ~ 31802563 (+) | False | satb1 |
| XR_002651288.1 | other | upstream | 494650 | 30875038 ~ 30878327 (+) | True | hmgn2 |
| TU219178 | other | upstream | 494665 | 30875118 ~ 30878312 (+) | False | hmgn2 |
| TU219179 | other | upstream | 494665 | 30875118 ~ 30878312 (+) | False | hmgn2 |
| TU218604 | other | upstream | 2256182 | 29070820 ~ 29116795 (+) | True | G161331 |
| XR_002651275.1 | other | upstream | 2613970 | 28745696 ~ 28759007 (+) | False | fam219b |
| TU219503 | other | downstream | 540665 | 32068862 ~ 32148190 (+) | True | G162017 |
| TU219521 | other | downstream | 708119 | 32236316 ~ 32295029 (+) | True | G162032 |
| TU219593 | other | downstream | 1185986 | 32714183 ~ 32719275 (+) | True | G162096 |
| TU220729 | other | downstream | 5225988 | 36754185 ~ 36754687 (+) | True | G162964 |
| TU220936 | other | downstream | 5881795 | 37409992 ~ 37411969 (+) | True | G163105 |
