Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU219617 |
| length | 778 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 3 |
| gene id | G162111 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 32736429 ~ 32739609 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU219606 | lncRNA | upstream | 48885 | 32678351 ~ 32687544 (+) | True | G162107 |
| TU219598 | lncRNA | upstream | 81264 | 32652026 ~ 32655165 (+) | False | G162099 |
| TU219596 | lncRNA | upstream | 81694 | 32652026 ~ 32654735 (+) | True | G162099 |
| TU219582 | lncRNA | upstream | 100940 | 32633971 ~ 32635489 (+) | True | G162087 |
| TU219536 | lncRNA | upstream | 120960 | 32613718 ~ 32615469 (+) | True | G162046 |
| TU219592 | lncRNA | downstream | 2378 | 32741987 ~ 32743737 (+) | False | LOC107196950 |
| XR_001518293.2 | lncRNA | downstream | 2445 | 32742054 ~ 32744007 (+) | True | LOC107196950 |
| TU219788 | lncRNA | downstream | 428108 | 33167717 ~ 33168084 (+) | False | G162239 |
| TU219790 | lncRNA | downstream | 428108 | 33167717 ~ 33168151 (+) | True | G162239 |
| TU219801 | lncRNA | downstream | 436521 | 33176130 ~ 33176329 (+) | True | G162247 |
| XM_007233722.3 | mRNA | upstream | 6578 | 32721244 ~ 32729851 (+) | True | LOC103041297 |
| XM_007233723.3 | mRNA | upstream | 34825 | 32681742 ~ 32701604 (+) | True | LOC103041596 |
| XM_022679876.1 | mRNA | upstream | 170539 | 32377101 ~ 32565890 (+) | True | LOC107196951 |
| XM_022679877.1 | mRNA | upstream | 170539 | 32377101 ~ 32565890 (+) | False | LOC107196951 |
| XM_022679870.1 | mRNA | upstream | 933866 | 31714912 ~ 31802563 (+) | False | satb1 |
| XM_007233718.3 | mRNA | downstream | 42465 | 32782074 ~ 32879256 (+) | True | LOC103040053 |
| XM_022679879.1 | mRNA | downstream | 166045 | 32905654 ~ 32915649 (+) | True | LOC103039334 |
| XM_022679880.1 | mRNA | downstream | 166045 | 32905654 ~ 32915649 (+) | False | LOC103039334 |
| XM_022679881.1 | mRNA | downstream | 178534 | 32918143 ~ 33043136 (+) | True | LOC103043655 |
| XM_022679409.1 | mRNA | downstream | 465098 | 33204707 ~ 33997444 (+) | True | LOC103027235 |
| TU219593 | other | upstream | 17154 | 32714183 ~ 32719275 (+) | True | G162096 |
| TU219521 | other | upstream | 441400 | 32236316 ~ 32295029 (+) | True | G162032 |
| TU219503 | other | upstream | 588239 | 32068862 ~ 32148190 (+) | True | G162017 |
| TU219178 | other | upstream | 1858117 | 30875118 ~ 30878312 (+) | False | hmgn2 |
| TU220729 | other | downstream | 4014576 | 36754185 ~ 36754687 (+) | True | G162964 |
| TU220936 | other | downstream | 4670383 | 37409992 ~ 37411969 (+) | True | G163105 |
