Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007243996.3 |
| length | 797 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | LOC103031281 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 6063252 ~ 6065533 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:1902600 | proton transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0001666 | response to hypoxia | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| id | description |
|---|---|
| K02263 | COX4; cytochrome c oxidase subunit 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU211916 | lncRNA | upstream | 1255 | 6056669 ~ 6061997 (+) | True | G156326 |
| TU211922 | lncRNA | upstream | 10870 | 6050480 ~ 6052382 (+) | True | G156331 |
| TU211812 | lncRNA | upstream | 414678 | 5645881 ~ 5648574 (+) | True | G156233 |
| TU211802 | lncRNA | upstream | 451979 | 5602332 ~ 5611273 (+) | True | G156225 |
| TU211788 | lncRNA | upstream | 461593 | 5601105 ~ 5601659 (+) | True | G156215 |
| TU211931 | lncRNA | downstream | 51612 | 6117145 ~ 6117589 (+) | True | G156340 |
| TU212013 | lncRNA | downstream | 241192 | 6306725 ~ 6307420 (+) | True | G156395 |
| TU212015 | lncRNA | downstream | 242700 | 6308233 ~ 6308561 (+) | True | G156397 |
| TU212017 | lncRNA | downstream | 243839 | 6309372 ~ 6309620 (+) | True | G156399 |
| TU212022 | lncRNA | downstream | 248419 | 6313952 ~ 6317024 (+) | True | G156402 |
| XM_007244000.3 | mRNA | upstream | 20749 | 5703096 ~ 6042503 (+) | True | gse1 |
| XM_015604469.2 | mRNA | upstream | 20749 | 5703096 ~ 6042503 (+) | False | gse1 |
| XM_007244001.3 | mRNA | upstream | 20749 | 5703122 ~ 6042503 (+) | False | gse1 |
| XM_022679500.1 | mRNA | upstream | 422139 | 5639248 ~ 5641113 (+) | True | LOC103034771 |
| XM_007244010.3 | mRNA | upstream | 433062 | 5621220 ~ 5630190 (+) | True | atmin |
| XM_007243995.3 | mRNA | downstream | 1682 | 6067215 ~ 6095668 (+) | True | LOC103030962 |
| XM_007243994.3 | mRNA | downstream | 35220 | 6100753 ~ 6111006 (+) | True | irf8 |
| XM_007244016.3 | mRNA | downstream | 236315 | 6301848 ~ 6305572 (+) | True | foxf1 |
| XM_022679503.1 | mRNA | downstream | 259288 | 6324821 ~ 6363149 (+) | False | dbndd1 |
| XM_015604453.2 | mRNA | downstream | 259291 | 6324824 ~ 6363149 (+) | True | dbndd1 |
| TU211750 | other | upstream | 905852 | 5157154 ~ 5157400 (+) | True | G156188 |
| TU211262 | other | upstream | 3308140 | 2738361 ~ 2755112 (+) | True | G155776 |
| TU210855 | other | upstream | 4793873 | 1265820 ~ 1269379 (+) | False | G155491 |
| TU212485 | other | downstream | 1306843 | 7372376 ~ 7431568 (+) | False | LOC111194759 |
| TU212490 | other | downstream | 1321969 | 7387502 ~ 7404556 (+) | False | LOC111194759 |
| TU212659 | other | downstream | 1535034 | 7600567 ~ 7606668 (+) | True | G156840 |
| TU212948 | other | downstream | 2504397 | 8569930 ~ 8570877 (+) | True | G157055 |
| TU213377 | other | downstream | 3875296 | 9940829 ~ 9941805 (+) | True | G157383 |
